3dzc
From Proteopedia
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==2.35 Angstrom resolution structure of WecB (VC0917), a UDP-N-acetylglucosamine 2-epimerase from Vibrio cholerae.== | ==2.35 Angstrom resolution structure of WecB (VC0917), a UDP-N-acetylglucosamine 2-epimerase from Vibrio cholerae.== | ||
| - | <StructureSection load='3dzc' size='340' side='right' caption='[[3dzc]], [[Resolution|resolution]] 2.35Å' scene=''> | + | <StructureSection load='3dzc' size='340' side='right'caption='[[3dzc]], [[Resolution|resolution]] 2.35Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dzc]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3dzc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DZC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DZC FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | |
| - | <tr><td class="sblockLbl"><b>[[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dzc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dzc OCA], [https://pdbe.org/3dzc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dzc RCSB], [https://www.ebi.ac.uk/pdbsum/3dzc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dzc ProSAT], [https://www.topsan.org/Proteins/CSGID/3dzc TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | == Function == |
| - | <table> | + | [https://www.uniprot.org/uniprot/Q9KTI5_VIBCH Q9KTI5_VIBCH] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dz/3dzc_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dz/3dzc_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dzc ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
[[Category: Vibrio cholerae]] | [[Category: Vibrio cholerae]] | ||
| - | [[Category: Anderson | + | [[Category: Anderson WF]] |
| - | + | [[Category: Dubrovska I]] | |
| - | [[Category: Dubrovska | + | [[Category: Hasseman J]] |
| - | [[Category: Hasseman | + | [[Category: Kwon K]] |
| - | [[Category: Kwon | + | [[Category: Minasov G]] |
| - | [[Category: Minasov | + | [[Category: Papazisi L]] |
| - | [[Category: Papazisi | + | [[Category: Peterson SN]] |
| - | [[Category: Peterson | + | [[Category: Shuvalova L]] |
| - | [[Category: Shuvalova | + | [[Category: Winsor J]] |
| - | [[Category: Winsor | + | |
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Current revision
2.35 Angstrom resolution structure of WecB (VC0917), a UDP-N-acetylglucosamine 2-epimerase from Vibrio cholerae.
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Categories: Large Structures | Vibrio cholerae | Anderson WF | Dubrovska I | Hasseman J | Kwon K | Minasov G | Papazisi L | Peterson SN | Shuvalova L | Winsor J
