4cs8

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==Crystal structure of the asymmetric human metapneumovirus M2-1 tetramer, form 2==
==Crystal structure of the asymmetric human metapneumovirus M2-1 tetramer, form 2==
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<StructureSection load='4cs8' size='340' side='right' caption='[[4cs8]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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<StructureSection load='4cs8' size='340' side='right'caption='[[4cs8]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4cs8]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CS8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4CS8 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4cs8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_metapneumovirus Human metapneumovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CS8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4CS8 FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4cs7|4cs7]], [[4cs9|4cs9]], [[4csa|4csa]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4cs8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cs8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4cs8 RCSB], [http://www.ebi.ac.uk/pdbsum/4cs8 PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4cs8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cs8 OCA], [https://pdbe.org/4cs8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4cs8 RCSB], [https://www.ebi.ac.uk/pdbsum/4cs8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4cs8 ProSAT]</span></td></tr>
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<table>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8QN58_9MONO Q8QN58_9MONO]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The M2-1 protein of human metapneumovirus (HMPV) is a zinc-binding transcription antiterminator which is highly conserved among pneumoviruses. We report the structure of tetrameric HMPV M2-1. Each protomer features a N-terminal zinc finger domain and an alpha-helical tetramerization motif forming a rigid unit, followed by a flexible linker and an alpha-helical core domain. The tetramer is asymmetric, three of the protomers exhibiting a closed conformation, and one an open conformation. Molecular dynamics simulations and SAXS demonstrate a dynamic equilibrium between open and closed conformations in solution. Structures of adenosine monophosphate- and DNA- bound M2-1 establish the role of the zinc finger domain in base-specific recognition of RNA. Binding to 'gene end' RNA sequences stabilized the closed conformation of M2-1 leading to a drastic shift in the conformational landscape of M2-1. We propose a model for recognition of gene end signals and discuss the implications of these findings for transcriptional regulation in pneumoviruses.
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Drastic changes in conformational dynamics of the antiterminator M2-1 regulate transcription efficiency in Pneumovirinae.,Leyrat C, Renner M, Harlos K, Huiskonen JT, Grimes JM Elife. 2014 May 19:e02674. doi: 10.7554/eLife.02674. PMID:24842877<ref>PMID:24842877</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4cs8" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Grimes, J M.]]
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[[Category: Human metapneumovirus]]
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[[Category: Harlos, K.]]
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[[Category: Large Structures]]
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[[Category: Leyrat, C.]]
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[[Category: Grimes JM]]
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[[Category: Renner, M.]]
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[[Category: Harlos K]]
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[[Category: Antiterminator]]
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[[Category: Leyrat C]]
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[[Category: Asymmetric tetramer]]
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[[Category: Renner M]]
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[[Category: Modular protein]]
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[[Category: Rna-binding]]
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[[Category: Transcription elongation]]
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[[Category: Viral protein]]
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Current revision

Crystal structure of the asymmetric human metapneumovirus M2-1 tetramer, form 2

PDB ID 4cs8

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