4oy7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:37, 28 December 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper.==
==Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper.==
-
<StructureSection load='4oy7' size='340' side='right' caption='[[4oy7]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='4oy7' size='340' side='right'caption='[[4oy7]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4oy7]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OY7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OY7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4oy7]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_coelicolor_A3(2) Streptomyces coelicolor A3(2)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OY7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OY7 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4oy6|4oy6]], [[4oy8|4oy8]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4oy7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4oy7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4oy7 RCSB], [http://www.ebi.ac.uk/pdbsum/4oy7 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4oy7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4oy7 OCA], [https://pdbe.org/4oy7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4oy7 RCSB], [https://www.ebi.ac.uk/pdbsum/4oy7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4oy7 ProSAT]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9RJY2_STRCO Q9RJY2_STRCO]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
For decades, the enzymatic conversion of cellulose was thought to rely on the synergistic action of hydrolytic enzymes, but recent work has shown that lytic polysaccharide monooxygenases (LPMOs) are important contributors to this process. We describe the structural and functional characterization of two functionally coupled cellulose-active LPMOs belonging to auxiliary activity family 10 (AA10) that commonly occur in cellulolytic bacteria. One of these LPMOs cleaves glycosidic bonds by oxidation of the C1 carbon, whereas the other can oxidize both C1 and C4. We thus demonstrate that C4 oxidation is not confined to fungal AA9-type LPMOs. X-ray crystallographic structures were obtained for the enzyme pair from Streptomyces coelicolor, solved at 1.3 A (ScLPMO10B) and 1.5 A (CelS2 or ScLPMO10C) resolution. Structural comparisons revealed differences in active site architecture that could relate to the ability to oxidize C4 (and that also seem to apply to AA9-type LPMOs). Despite variation in active site architecture, the two enzymes exhibited similar affinities for Cu(2+) (12-31 nM), redox potentials (242 and 251 mV), and electron paramagnetic resonance spectra, with only the latter clearly different from those of chitin-active AA10-type LPMOs. We conclude that substrate specificity depends not on copper site architecture, but rather on variation in substrate binding and orientation. During cellulose degradation, the members of this LPMO pair act in synergy, indicating different functional roles and providing a rationale for the abundance of these enzymes in biomass-degrading organisms.
 +
 
 +
Structural and functional characterization of a conserved pair of bacterial cellulose-oxidizing lytic polysaccharide monooxygenases.,Forsberg Z, Mackenzie AK, Sorlie M, Rohr AK, Helland R, Arvai AS, Vaaje-Kolstad G, Eijsink VG Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8446-51. doi:, 10.1073/pnas.1402771111. Epub 2014 May 27. PMID:24912171<ref>PMID:24912171</ref>
 +
 
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 4oy7" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Arvai, A S.]]
+
[[Category: Large Structures]]
-
[[Category: Eijsink, V G.H.]]
+
[[Category: Arvai AS]]
-
[[Category: Forsberg, Z.]]
+
[[Category: Eijsink VGH]]
-
[[Category: Helland, R.]]
+
[[Category: Forsberg Z]]
-
[[Category: Mackenzie, A K.]]
+
[[Category: Helland R]]
-
[[Category: Rohr, A K.]]
+
[[Category: Mackenzie AK]]
-
[[Category: Sorlie, M.]]
+
[[Category: Rohr AK]]
-
[[Category: Vaaje-Kolstad, G.]]
+
[[Category: Sorlie M]]
-
[[Category: Aa10]]
+
[[Category: Vaaje-Kolstad G]]
-
[[Category: Cbm33]]
+
-
[[Category: Cellulose degradation]]
+
-
[[Category: Copper monooxygenase]]
+
-
[[Category: Gh61]]
+
-
[[Category: Lpmo]]
+
-
[[Category: Pmo]]
+

Current revision

Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper.

PDB ID 4oy7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools