This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3ntd
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Structure of the Shewanella loihica PV-4 NADH-dependent persulfide reductase C531S Mutant== | ==Structure of the Shewanella loihica PV-4 NADH-dependent persulfide reductase C531S Mutant== | ||
| - | <StructureSection load='3ntd' size='340' side='right' caption='[[3ntd]], [[Resolution|resolution]] 1.99Å' scene=''> | + | <StructureSection load='3ntd' size='340' side='right'caption='[[3ntd]], [[Resolution|resolution]] 1.99Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ntd]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3ntd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_loihica_PV-4 Shewanella loihica PV-4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NTD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NTD FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr> | |
| - | <tr><td class="sblockLbl"><b>[[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ntd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ntd OCA], [https://pdbe.org/3ntd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ntd RCSB], [https://www.ebi.ac.uk/pdbsum/3ntd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ntd ProSAT]</span></td></tr> |
| - | + | </table> | |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | == Function == |
| - | <table> | + | [https://www.uniprot.org/uniprot/A3QAV3_SHELP A3QAV3_SHELP] |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 15: | Line 16: | ||
Characterization of an NADH-dependent persulfide reductase from <i>Shewanella loihica</i> PV-4: Implications for the mechanism of sulfur respiration via FAD-dependent enzymes.,Warner MD, Lukose V, Lee KH, Lopez K, Sazinsky M, Crane Iii EJ Biochemistry. 2010 Nov 23. PMID:21090815<ref>PMID:21090815</ref> | Characterization of an NADH-dependent persulfide reductase from <i>Shewanella loihica</i> PV-4: Implications for the mechanism of sulfur respiration via FAD-dependent enzymes.,Warner MD, Lukose V, Lee KH, Lopez K, Sazinsky M, Crane Iii EJ Biochemistry. 2010 Nov 23. PMID:21090815<ref>PMID:21090815</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
| + | <div class="pdbe-citations 3ntd" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Shewanella loihica]] | + | [[Category: Shewanella loihica PV-4]] |
| - | [[Category: Crane | + | [[Category: Crane EJ]] |
| - | [[Category: Lee | + | [[Category: Lee KH]] |
| - | [[Category: Lukose | + | [[Category: Lukose V]] |
| - | [[Category: Sazinsky | + | [[Category: Sazinsky MH]] |
| - | [[Category: Warner | + | [[Category: Warner MD]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Structure of the Shewanella loihica PV-4 NADH-dependent persulfide reductase C531S Mutant
| |||||||||||
