3onm

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==Effector binding Domain of LysR-Type transcription factor RovM from Y. pseudotuberculosis==
==Effector binding Domain of LysR-Type transcription factor RovM from Y. pseudotuberculosis==
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<StructureSection load='3onm' size='340' side='right' caption='[[3onm]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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<StructureSection load='3onm' size='340' side='right'caption='[[3onm]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3onm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ONM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ONM FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3onm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis_IP_31758 Yersinia pseudotuberculosis IP 31758]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ONM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ONM FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lrhA, RovM, YpsIP31758_1452 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=633 Yersinia pseudotuberculosis])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3onm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3onm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3onm RCSB], [http://www.ebi.ac.uk/pdbsum/3onm PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3onm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3onm OCA], [https://pdbe.org/3onm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3onm RCSB], [https://www.ebi.ac.uk/pdbsum/3onm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3onm ProSAT]</span></td></tr>
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<table>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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In enteropathogenic Yersinia, the expression of several early-phase virulence factors such as invasin is tightly regulated in response to environmental cues. The responsible regulatory network is complex, involving several regulatory RNAs and proteins such as the LysR-type transcription regulator (LTTR) RovM. In this study, the crystal structure of the effector-binding domain (EBD) of RovM, the first LTTR protein described as being involved in virulence regulation, was determined at a resolution of 2.4 A. Size-exclusion chromatography and comparison with structures of full-length LTTRs show that RovM is most likely to adopt a tetrameric arrangement with two distant DNA-binding domains (DBDs), causing the DNA to bend around it. Additionally, a cavity was detected in RovM which could bind small inducer molecules.
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Structure of the effector-binding domain of the LysR-type transcription factor RovM from Yersinia pseudotuberculosis.,Quade N, Dieckmann M, Haffke M, Heroven AK, Dersch P, Heinz DW Acta Crystallogr D Biol Crystallogr. 2011 Feb;67(Pt 2):81-90. Epub 2011, Jan 8. PMID:21245528<ref>PMID:21245528</ref>
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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</div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Yersinia pseudotuberculosis]]
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[[Category: Large Structures]]
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[[Category: Dersch, P.]]
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[[Category: Yersinia pseudotuberculosis IP 31758]]
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[[Category: Diekmann, M.]]
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[[Category: Dersch P]]
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[[Category: Haffke, M.]]
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[[Category: Diekmann M]]
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[[Category: Heinz, D W.]]
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[[Category: Haffke M]]
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[[Category: Heroven, A K.]]
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[[Category: Heinz DW]]
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[[Category: Quade, N.]]
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[[Category: Heroven AK]]
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[[Category: Lysr]]
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[[Category: Quade N]]
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[[Category: Rovm]]
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[[Category: Transcription]]
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[[Category: Transcription factor]]
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[[Category: Virulence factor]]
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Current revision

Effector binding Domain of LysR-Type transcription factor RovM from Y. pseudotuberculosis

PDB ID 3onm

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