3p9t

From Proteopedia

(Difference between revisions)

Current revision

SmeT-Triclosan complex

Structural highlights

3p9t is a 2 chain structure with sequence from Stenotrophomonas maltophilia. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 2.02Å
Ligands:	,
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q8KLP4_STEMA

Publication Abstract from PubMed

The wide utilization of biocides poses a concern on the impact of these compounds on natural bacterial populations. Furthermore, it has been demonstrated that biocides can select, at least in laboratory experiments, antibiotic resistant bacteria. This situation has raised concerns, not just on scientists and clinicians, but also on regulatory agencies, which are demanding studies on the impact that the utilization of biocides may have on the development on resistance and consequently on the treatment of infectious diseases and on human health. In the present article, we explored the possibility that the widely used biocide triclosan might induce antibiotic resistance using as a model the opportunistic pathogen Stenotrophomonas maltophilia. Biochemical, functional and structural studies were performed, focusing on SmeDEF, the most relevant antibiotic- and triclosan-removing multidrug efflux pump of S. maltophilia. Expression of smeDEF is regulated by the repressor SmeT. Triclosan released SmeT from its operator and induces the expression of smeDEF, thus reducing the susceptibility of S. maltophilia to antibiotics in the presence of the biocide. The structure of SmeT bound to triclosan is described. Two molecules of triclosan were found to bind to one subunit of the SmeT homodimer. The binding of the biocide stabilizes the N terminal domain of both subunits in a conformation unable to bind DNA. To our knowledge this is the first crystal structure obtained for a transcriptional regulator bound to triclosan. This work provides the molecular basis for understanding the mechanisms allowing the induction of phenotypic resistance to antibiotics by triclosan.

The Binding of Triclosan to SmeT, the Repressor of the Multidrug Efflux Pump SmeDEF, Induces Antibiotic Resistance in Stenotrophomonas maltophilia.,Hernandez A, Ruiz FM, Romero A, Martinez JL PLoS Pathog. 2011 Jun;7(6):e1002103. Epub 2011 Jun 30. PMID:21738470^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Hernandez A, Ruiz FM, Romero A, Martinez JL. The Binding of Triclosan to SmeT, the Repressor of the Multidrug Efflux Pump SmeDEF, Induces Antibiotic Resistance in Stenotrophomonas maltophilia. PLoS Pathog. 2011 Jun;7(6):e1002103. Epub 2011 Jun 30. PMID:21738470 doi:10.1371/journal.ppat.1002103

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3p9t"

@@ Line 1: / Line 1: @@
 ==SmeT-Triclosan complex==
-<StructureSection load='3p9t' size='340' side='right' caption='[[3p9t]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
+<StructureSection load='3p9t' size='340' side='right'caption='[[3p9t]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3p9t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Stenotrophomonas_maltophilia Stenotrophomonas maltophilia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P9T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3P9T FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3p9t]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Stenotrophomonas_maltophilia Stenotrophomonas maltophilia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P9T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3P9T FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TCL:TRICLOSAN'>TCL</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.02&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">smeT ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=40324 Stenotrophomonas maltophilia])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TCL:TRICLOSAN'>TCL</scene></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3p9t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p9t OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3p9t RCSB], [http://www.ebi.ac.uk/pdbsum/3p9t PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3p9t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p9t OCA], [https://pdbe.org/3p9t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3p9t RCSB], [https://www.ebi.ac.uk/pdbsum/3p9t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3p9t ProSAT]</span></td></tr>
-<table>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q8KLP4_STEMA Q8KLP4_STEMA]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 13: / Line 16: @@
 The Binding of Triclosan to SmeT, the Repressor of the Multidrug Efflux Pump SmeDEF, Induces Antibiotic Resistance in Stenotrophomonas maltophilia.,Hernandez A, Ruiz FM, Romero A, Martinez JL PLoS Pathog. 2011 Jun;7(6):e1002103. Epub 2011 Jun 30. PMID:21738470<ref>PMID:21738470</ref>
-From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 3p9t" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
 [[Category: Stenotrophomonas maltophilia]]
-[[Category: Hernandez, A.]]
+[[Category: Hernandez A]]
-[[Category: Martinez, J L.]]
+[[Category: Martinez JL]]
-[[Category: Romero, A.]]
+[[Category: Romero A]]
-[[Category: Ruiz, F M.]]
+[[Category: Ruiz FM]]
-[[Category: Antibacterial]]
-[[Category: Antifungal]]
-[[Category: Transcription repressor]]
-[[Category: Transcription-antibiotic complex]]

3p9t

From Proteopedia

Current revision

SmeT-Triclosan complex

Structural highlights

Function

Publication Abstract from PubMed

References

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