3qo4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:07, 17 October 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==The Crystal Structure of Death Receptor 6==
==The Crystal Structure of Death Receptor 6==
-
<StructureSection load='3qo4' size='340' side='right' caption='[[3qo4]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='3qo4' size='340' side='right'caption='[[3qo4]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3qo4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QO4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QO4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3qo4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QO4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QO4 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TNFRSF21, DR6, UNQ437/PRO868 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qo4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qo4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qo4 RCSB], [http://www.ebi.ac.uk/pdbsum/3qo4 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qo4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qo4 OCA], [https://pdbe.org/3qo4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qo4 RCSB], [https://www.ebi.ac.uk/pdbsum/3qo4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qo4 ProSAT]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TNR21_HUMAN TNR21_HUMAN] May activate NF-kappa-B and promote apoptosis. May activate JNK and be involved in T-cell differentiation. Required for both normal cell body death and axonal pruning. Trophic-factor deprivation triggers the cleavage of surface APP by beta-secretase to release sAPP-beta which is further cleaved to release an N-terminal fragment of APP (N-APP). N-APP binds TNFRSF21 triggering caspase activation and degeneration of both neuronal cell bodies (via caspase-3) and axons (via caspase-6).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 13: Line 16:
The Crystal Structure of Death Receptor 6 (DR6): A Potential Receptor of the Amyloid Precursor Protein (APP).,Kuester M, Kemmerzehl S, Dahms SO, Roeser D, Than ME J Mol Biol. 2011 Jun 3;409(2):189-201. Epub 2011 Apr 2. PMID:21463639<ref>PMID:21463639</ref>
The Crystal Structure of Death Receptor 6 (DR6): A Potential Receptor of the Amyloid Precursor Protein (APP).,Kuester M, Kemmerzehl S, Dahms SO, Roeser D, Than ME J Mol Biol. 2011 Jun 3;409(2):189-201. Epub 2011 Apr 2. PMID:21463639<ref>PMID:21463639</ref>
-
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3qo4" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Tumor necrosis factor receptor 3D structures|Tumor necrosis factor receptor 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 20: Line 27:
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Dahms, S O.]]
+
[[Category: Large Structures]]
-
[[Category: Kemmerzehl, S.]]
+
[[Category: Dahms SO]]
-
[[Category: Kuester, M.]]
+
[[Category: Kemmerzehl S]]
-
[[Category: Roeser, D.]]
+
[[Category: Kuester M]]
-
[[Category: Than, M E.]]
+
[[Category: Roeser D]]
-
[[Category: Alzheimer s disease]]
+
[[Category: Than ME]]
-
[[Category: Apoptosis]]
+
-
[[Category: Ligand-receptor-recognition]]
+

Current revision

The Crystal Structure of Death Receptor 6

PDB ID 3qo4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3qo4"
Personal tools