3r5s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:37, 30 October 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of apo-ViuP==
==Crystal structure of apo-ViuP==
-
<StructureSection load='3r5s' size='340' side='right' caption='[[3r5s]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
+
<StructureSection load='3r5s' size='340' side='right'caption='[[3r5s]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3r5s]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R5S OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R5S FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3r5s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R5S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R5S FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.791&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3r5t|3r5t]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">viuP, VC_0776 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 Vibrio cholerae])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r5s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r5s OCA], [https://pdbe.org/3r5s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r5s RCSB], [https://www.ebi.ac.uk/pdbsum/3r5s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r5s ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r5s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r5s OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r5s RCSB], [http://www.ebi.ac.uk/pdbsum/3r5s PDBsum]</span></td></tr>
+
</table>
-
<table>
+
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9RCF6_VIBCL Q9RCF6_VIBCL]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 14: Line 16:
Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response.,Li N, Zhang C, Li B, Liu X, Huang Y, Xu S, Gu L J Biol Chem. 2012 Mar 16;287(12):8912-9. Epub 2012 Jan 30. PMID:22291019<ref>PMID:22291019</ref>
Unique iron coordination in iron-chelating molecule vibriobactin helps Vibrio cholerae evade mammalian siderocalin-mediated immune response.,Li N, Zhang C, Li B, Liu X, Huang Y, Xu S, Gu L J Biol Chem. 2012 Mar 16;287(12):8912-9. Epub 2012 Jan 30. PMID:22291019<ref>PMID:22291019</ref>
-
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3r5s" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Vibrio cholerae]]
[[Category: Vibrio cholerae]]
-
[[Category: Gu, L.]]
+
[[Category: Gu L]]
-
[[Category: Huang, Y.]]
+
[[Category: Huang Y]]
-
[[Category: Li, B.]]
+
[[Category: Li B]]
-
[[Category: Li, N.]]
+
[[Category: Li N]]
-
[[Category: Liu, X.]]
+
[[Category: Liu X]]
-
[[Category: Xu, S.]]
+
[[Category: Xu S]]
-
[[Category: Zhang, C.]]
+
[[Category: Zhang C]]
-
[[Category: Iron-vibriobactin transport protein]]
+
-
[[Category: Metal transport]]
+
-
[[Category: Periplasmic transport protein]]
+

Current revision

Crystal structure of apo-ViuP

PDB ID 3r5s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools