This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3s0p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:42, 14 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Copper-reconstituted Tomato Chloroplast Superoxide Dismutase==
==Copper-reconstituted Tomato Chloroplast Superoxide Dismutase==
-
<StructureSection load='3s0p' size='340' side='right' caption='[[3s0p]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+
<StructureSection load='3s0p' size='340' side='right'caption='[[3s0p]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3s0p]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Solanum_lycopersicum Solanum lycopersicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S0P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3S0P FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3s0p]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Solanum_lycopersicum Solanum lycopersicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S0P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S0P FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3km1|3km1]], [[3km2|3km2]], [[3hog|3hog]], [[3pu7|3pu7]], [[3mkg|3mkg]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SODCP.2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4081 Solanum lycopersicum])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s0p OCA], [https://pdbe.org/3s0p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s0p RCSB], [https://www.ebi.ac.uk/pdbsum/3s0p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s0p ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
+
</table>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3s0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s0p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3s0p RCSB], [http://www.ebi.ac.uk/pdbsum/3s0p PDBsum]</span></td></tr>
+
== Function ==
-
<table>
+
[https://www.uniprot.org/uniprot/SODCP_SOLLC SODCP_SOLLC] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
==See Also==
==See Also==
-
*[[Superoxide Dismutase|Superoxide Dismutase]]
+
*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Solanum lycopersicum]]
[[Category: Solanum lycopersicum]]
-
[[Category: Superoxide dismutase]]
+
[[Category: Galaleldeen A]]
-
[[Category: Galaleldeen, A.]]
+
[[Category: Hart PJ]]
-
[[Category: Hart, P J.]]
+
[[Category: Taylor AB]]
-
[[Category: Taylor, A B.]]
+
-
[[Category: Antioxidant]]
+
-
[[Category: Chloroplast]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Transit peptide]]
+

Current revision

Copper-reconstituted Tomato Chloroplast Superoxide Dismutase

PDB ID 3s0p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools