3ta8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:30, 1 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure HP-NAP from strain YS39 iron loaded (cocrystallization 5mM)==
==Crystal structure HP-NAP from strain YS39 iron loaded (cocrystallization 5mM)==
-
<StructureSection load='3ta8' size='340' side='right' caption='[[3ta8]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='3ta8' size='340' side='right'caption='[[3ta8]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ta8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3TA8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ta8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TA8 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3t9j|3t9j]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">napA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210 Helicobacter pylori])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ta8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ta8 OCA], [https://pdbe.org/3ta8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ta8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ta8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ta8 ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ta8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ta8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ta8 RCSB], [http://www.ebi.ac.uk/pdbsum/3ta8 PDBsum]</span></td></tr>
+
</table>
-
<table>
+
== Function ==
 +
[https://www.uniprot.org/uniprot/G1UIZ3_HELPX G1UIZ3_HELPX]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 14: Line 16:
A new crystal lattice structure of Helicobacter pylori neutrophil-activating protein (HP-NAP).,Tsuruta O, Yokoyama H, Fujii S Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Feb 1;68(Pt 2):134-40., Epub 2012 Jan 25. PMID:22297984<ref>PMID:22297984</ref>
A new crystal lattice structure of Helicobacter pylori neutrophil-activating protein (HP-NAP).,Tsuruta O, Yokoyama H, Fujii S Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Feb 1;68(Pt 2):134-40., Epub 2012 Jan 25. PMID:22297984<ref>PMID:22297984</ref>
-
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3ta8" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
Line 21: Line 24:
</StructureSection>
</StructureSection>
[[Category: Helicobacter pylori]]
[[Category: Helicobacter pylori]]
-
[[Category: Fujii, S.]]
+
[[Category: Large Structures]]
-
[[Category: Tsuruta, O.]]
+
[[Category: Fujii S]]
-
[[Category: Yokoyama, H.]]
+
[[Category: Tsuruta O]]
-
[[Category: Dodecamer]]
+
[[Category: Yokoyama H]]
-
[[Category: Four-helix bundle]]
+
-
[[Category: Metal transport]]
+

Current revision

Crystal structure HP-NAP from strain YS39 iron loaded (cocrystallization 5mM)

PDB ID 3ta8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools