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3v39
From Proteopedia
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==Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus== | ==Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus== | ||
| - | <StructureSection load='3v39' size='340' side='right' caption='[[3v39]], [[Resolution|resolution]] 1.45Å' scene=''> | + | <StructureSection load='3v39' size='340' side='right'caption='[[3v39]], [[Resolution|resolution]] 1.45Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_15356 Atcc 15356]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3V39 FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bd3459 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bd3459 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 ATCC 15356])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [https://pdbe.org/3v39 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [https://www.ebi.ac.uk/pdbsum/3v39 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v39 ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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Specialized peptidoglycan hydrolases sculpt the intra-bacterial niche of predatory Bdellovibrio and increase population fitness.,Lerner TR, Lovering AL, Bui NK, Uchida K, Aizawa S, Vollmer W, Sockett RE PLoS Pathog. 2012 Feb;8(2):e1002524. Epub 2012 Feb 9. PMID:22346754<ref>PMID:22346754</ref> | Specialized peptidoglycan hydrolases sculpt the intra-bacterial niche of predatory Bdellovibrio and increase population fitness.,Lerner TR, Lovering AL, Bui NK, Uchida K, Aizawa S, Vollmer W, Sockett RE PLoS Pathog. 2012 Feb;8(2):e1002524. Epub 2012 Feb 9. PMID:22346754<ref>PMID:22346754</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
| + | <div class="pdbe-citations 3v39" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Atcc 15356]] |
| + | [[Category: Large Structures]] | ||
[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]] | [[Category: Serine-type D-Ala-D-Ala carboxypeptidase]] | ||
| - | [[Category: Lerner, T R | + | [[Category: Lerner, T R]] |
| - | [[Category: Lovering, A L | + | [[Category: Lovering, A L]] |
| - | [[Category: Sockett, R E | + | [[Category: Sockett, R E]] |
[[Category: Endopeptidase]] | [[Category: Endopeptidase]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Peptidoglycan transpeptidase fold]] | [[Category: Peptidoglycan transpeptidase fold]] | ||
[[Category: Serine modified by hepes buffer molecule]] | [[Category: Serine modified by hepes buffer molecule]] | ||
Current revision
Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus
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