This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3vdk
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of circumsporozoite protein aTSR domain, R32 platinum-bound form== | ==Crystal structure of circumsporozoite protein aTSR domain, R32 platinum-bound form== | ||
| - | <StructureSection load='3vdk' size='340' side='right' caption='[[3vdk]], [[Resolution|resolution]] 1.85Å' scene=''> | + | <StructureSection load='3vdk' size='340' side='right'caption='[[3vdk]], [[Resolution|resolution]] 1.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3vdk]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3vdk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plaf7 Plaf7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VDK FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vdj|3vdj]], [[3vdl|3vdl]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vdj|3vdj]], [[3vdl|3vdl]]</div></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PFC0210c ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PFC0210c ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 PLAF7])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdk OCA], [https://pdbe.org/3vdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdk RCSB], [https://www.ebi.ac.uk/pdbsum/3vdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdk ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 14: | Line 15: | ||
Unexpected fold in the circumsporozoite protein target of malaria vaccines.,Doud MB, Koksal AC, Mi LZ, Song G, Lu C, Springer TA Proc Natl Acad Sci U S A. 2012 Apr 30. PMID:22547819<ref>PMID:22547819</ref> | Unexpected fold in the circumsporozoite protein target of malaria vaccines.,Doud MB, Koksal AC, Mi LZ, Song G, Lu C, Springer TA Proc Natl Acad Sci U S A. 2012 Apr 30. PMID:22547819<ref>PMID:22547819</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
| + | <div class="pdbe-citations 3vdk" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Doud, M B | + | [[Category: Plaf7]] |
| - | [[Category: Koksal, A C | + | [[Category: Doud, M B]] |
| - | [[Category: Lu, C | + | [[Category: Koksal, A C]] |
| - | [[Category: Mi, L Z | + | [[Category: Lu, C]] |
| - | [[Category: Song, G | + | [[Category: Mi, L Z]] |
| - | [[Category: Springer, T A | + | [[Category: Song, G]] |
| + | [[Category: Springer, T A]] | ||
[[Category: Atsr]] | [[Category: Atsr]] | ||
[[Category: Cell invasion]] | [[Category: Cell invasion]] | ||
[[Category: Tsr]] | [[Category: Tsr]] | ||
Current revision
Crystal structure of circumsporozoite protein aTSR domain, R32 platinum-bound form
| |||||||||||
Categories: Large Structures | Plaf7 | Doud, M B | Koksal, A C | Lu, C | Mi, L Z | Song, G | Springer, T A | Atsr | Cell invasion | Tsr
