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| | ==Crystal structure of the cytoplasmic domain of BfpC== | | ==Crystal structure of the cytoplasmic domain of BfpC== |
| - | <StructureSection load='3vhj' size='340' side='right' caption='[[3vhj]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='3vhj' size='340' side='right'caption='[[3vhj]], [[Resolution|resolution]] 1.90Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[3vhj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VHJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VHJ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3vhj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VHJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VHJ FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bfpC, MAR006 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vhj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vhj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vhj RCSB], [http://www.ebi.ac.uk/pdbsum/3vhj PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vhj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vhj OCA], [https://pdbe.org/3vhj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vhj RCSB], [https://www.ebi.ac.uk/pdbsum/3vhj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vhj ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/B7UTD4_ECO27 B7UTD4_ECO27] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | Structure of an Essential Type IV Pilus Biogenesis Protein Provides Insights into Pilus and Type II Secretion Systems.,Yamagata A, Milgotina E, Scanlon K, Craig L, Tainer JA, Donnenberg MS J Mol Biol. 2012 May 25;419(1-2):110-24. Epub 2012 Mar 1. PMID:22387466<ref>PMID:22387466</ref> | | Structure of an Essential Type IV Pilus Biogenesis Protein Provides Insights into Pilus and Type II Secretion Systems.,Yamagata A, Milgotina E, Scanlon K, Craig L, Tainer JA, Donnenberg MS J Mol Biol. 2012 May 25;419(1-2):110-24. Epub 2012 Mar 1. PMID:22387466<ref>PMID:22387466</ref> |
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| | </div> | | </div> |
| | + | <div class="pdbe-citations 3vhj" style="background-color:#fffaf0;"></div> |
| | == References == | | == References == |
| | <references/> | | <references/> |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Escherichia coli]] | | [[Category: Escherichia coli]] |
| - | [[Category: Donnenberg, M S.]] | + | [[Category: Large Structures]] |
| - | [[Category: Tainer, J A.]] | + | [[Category: Donnenberg MS]] |
| - | [[Category: Yamagata, A.]] | + | [[Category: Tainer JA]] |
| - | [[Category: Bfpd]] | + | [[Category: Yamagata A]] |
| - | [[Category: Membrane]]
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| - | [[Category: Membrane protein]]
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| - | [[Category: Type iv pilus biogenesis]]
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| Structural highlights
Function
B7UTD4_ECO27
Publication Abstract from PubMed
Type IV pili (T4Ps) are long cell surface filaments, essential for microcolony formation, tissue adherence, motility, transformation, and virulence by human pathogens. The enteropathogenic Escherichia coli bundle-forming pilus is a prototypic T4P assembled and powered by BfpD, a conserved GspE secretion superfamily ATPase held by inner-membrane proteins BfpC and BfpE, a GspF-family membrane protein. Although the T4P assembly machinery shares similarity with type II secretion (T2S) systems, the structural biochemistry of the T4P machine has been obscure. Here, we report the crystal structure of the two-domain BfpC cytoplasmic region (N-BfpC), responsible for binding to ATPase BfpD and membrane protein BfpE. The N-BfpC structure reveals a prominent central cleft between two alpha/beta-domains. Despite negligible sequence similarity, N-BfpC resembles PilM, a cytoplasmic T4P biogenesis protein. Yet surprisingly, N-BfpC has far greater structural similarity to T2S component EpsL, with which it also shares virtually no sequence identity. The C-terminus of the cytoplasmic domain, which leads to the transmembrane segment not present in the crystal structure, exits N-BfpC at a positively charged surface that most likely interacts with the inner membrane, positioning its central cleft for interactions with other Bfp components. Point mutations in surface-exposed N-BfpC residues predicted to be critical for interactions among BfpC, BfpE, and BfpD disrupt pilus biogenesis without precluding interactions with BfpE and BfpD and without affecting BfpD ATPase activity. These results illuminate the relationships between T4P biogenesis and T2S systems, imply that subtle changes in component residue interactions can have profound effects on function and pathogenesis, and suggest that T4P systems may be disrupted by inhibitors that do not preclude component assembly.
Structure of an Essential Type IV Pilus Biogenesis Protein Provides Insights into Pilus and Type II Secretion Systems.,Yamagata A, Milgotina E, Scanlon K, Craig L, Tainer JA, Donnenberg MS J Mol Biol. 2012 May 25;419(1-2):110-24. Epub 2012 Mar 1. PMID:22387466[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Yamagata A, Milgotina E, Scanlon K, Craig L, Tainer JA, Donnenberg MS. Structure of an Essential Type IV Pilus Biogenesis Protein Provides Insights into Pilus and Type II Secretion Systems. J Mol Biol. 2012 May 25;419(1-2):110-24. Epub 2012 Mar 1. PMID:22387466 doi:10.1016/j.jmb.2012.02.041
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