Dethiobiotin synthetase

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{{STRUCTURE_1dad| PDB=1dad | SIZE=400| SCENE= |right| CAPTION=Dethiobiotin synthetase complex with dethiobiotin, ADP and Mg+2 ion, [[1bs1]] }}
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<StructureSection load='1a82' size='450' side='right' caption='Dethiobiotin synthetase complex with dethiobiotin, ATP and Mg+2 ion (green) (PDB entry [[1a82]])' scene='49/493028/Cv/1'>
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'''Dethiobiotin synthetase''' (DTBS) catalyzes the first ring closure in the biotin synthesis. The reaction transforms 7,8-diaminononanoate (DAN), ATP and CO2 to dethiobiotin (DTB), ADP and phosphate.
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==3D dethiobiotin synthetase==
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'''Dethiobiotin synthetase''' (DTBS) or '''ATP-depenent dethiobiotin synthetase''' catalyzes the first ring closure in the biotin synthesis. The reaction transforms 7,8-diaminononanoate (DAN), ATP and CO2 to dethiobiotin (DTB), ADP and phosphate.<ref>PMID:4921568</ref>
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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== Structural highlights ==
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[[1dbs]], [[1dts]], [[1byi]] – EcDTBS – ''Escherichia coli''<br />
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The <scene name='49/493028/Cv/5'>active site contains the substrate (DAN), Mg+2 ion and ATP</scene>.<ref>PMID:9576910</ref>
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[[2qmo]] – HpDTBS – ''Helicobacter pylori''<br />
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[[3fgn]] – MtDTBS – ''Mycobacterium tuberculosis''<br />
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[[3of5]] – DTBS – ''Francicella tularensis''
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'''DTBS binary complex'''
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==3D dethiobiotin synthetase==
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[[Dethiobiotin synthetase 3D structures]]
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[[3fmf]] – MtDTBS + DAN<br />
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[[1dad]] – EcDTBS + ADP<BR />
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[[1dae]] - EcDTBS + nonanedioate derivative<br />
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[[3fmi]] – MtDTBS + aminopelargonic acid<br />
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[[1dai]] - EcDTBS + DAN
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'''DTBS ternary complex'''
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[[3qxc]] - HpDTBS + Mg + ATP<BR />
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[[1daf]] - EcDTBS + DAN + ADP<BR />
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[[1dag]] - EcDTBS + DAN + ATP derivative<br />
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[[3qxj]] - HpDTBS + Mg + ATP<BR />
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[[3qxs]] - HpDTBS + Mg + phosphoaminophosphonic acid
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'''DTBS quaternary complex'''
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[[1dah]] - EcDTBS + DAN + Mn + ATP derivative<br />
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[[1bs1]] - EcDTBS + DTB + Mg + ADP<BR />
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[[1a82]] - EcDTBS + DAN + Mg + ATP<BR />
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[[3fpa]] - MtDTBS + DTB + Mg + phosphate <br />
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[[3mle]] - HpDTBS + Mg + phosphate + ADP<BR />
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[[3qy0]] - HpDTBS + Mg + phosphate + GDP<BR />
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'''DTBS higher complexes'''
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[[1dam]] - EcDTBS + DTB + Mg + phosphate + ADP<BR />
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</StructureSection>
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[[1dak]] - EcDTBS + DAN + mixed anhydride + Mg + phosphate + ADP<BR />
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[[3qxh]] - HpDTBS + aminooctanoic acid + Mg + phosphate + ADP<BR />
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[[3qxx]] - HpDTBS + aminooctanoic acid + Mg + phosphate + GTP<BR />
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== References ==
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<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

Dethiobiotin synthetase complex with dethiobiotin, ATP and Mg+2 ion (green) (PDB entry 1a82)

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References

  1. ↑ Krell K, Eisenberg MA. The purification and properties of dethiobiotin synthetase. J Biol Chem. 1970 Dec 25;245(24):6558-66. PMID:4921568
  2. ↑ Kack H, Gibson KJ, Lindqvist Y, Schneider G. Snapshot of a phosphorylated substrate intermediate by kinetic crystallography. Proc Natl Acad Sci U S A. 1998 May 12;95(10):5495-500. PMID:9576910

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

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