4tqg
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of Megavirus UDP-GlcNAc 4,6-dehydratase, 5-epimerase Mg534== | |
| + | <StructureSection load='4tqg' size='340' side='right'caption='[[4tqg]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4tqg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Megavirus_chiliensis Megavirus chiliensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TQG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TQG FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4tqg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tqg OCA], [https://pdbe.org/4tqg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4tqg RCSB], [https://www.ebi.ac.uk/pdbsum/4tqg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4tqg ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/G5CSR9_9VIRU G5CSR9_9VIRU] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Giant viruses mimicking microbes, by the sizes of their particles and the heavily glycosylated fibrils surrounding their capsids, infect Acanthamoeba sp, which are ubiquitous unicellular eukaryotes. The glycans on fibrils are produced by virally encoded enzymes, organized in gene clusters. As Mimivirus, Megavirus particles are mainly composed of virally synthesized GlcNac. They also contain RhaNAc, a rare sugar; the enzymes involved in its synthesis are encoded by a gene cluster specific to Megavirus close relatives. We combined activity assays on two enzymes of the pathway with mass spectrometry and NMR studies to characterize their specificities. Mg534 is a 4,6-dehydratase 5-epimerases, its 3D structure suggests it belongs to a third subfamily of inverting dehydratases; Mg535, next in the pathway, is a bifunctional 3-epimerase 4-reductase. This study is another example that giant viruses perform their glycan synthesis using enzymes different from their cellular counterparts, raising again the question on the origin of these pathways. | ||
| - | + | Giant virus Megavirus chilensis encodes the biosynthetic pathway for uncommon acetamido sugars.,Piacente F, De Castro C, Jeudy S, Molinaro A, Salis A, Damonte G, Bernardi C, Abergel C, Tonetti M J Biol Chem. 2014 Jul 17. pii: jbc.M114.588947. PMID:25035429<ref>PMID:25035429</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| + | </div> | ||
| + | <div class="pdbe-citations 4tqg" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Megavirus chiliensis]] | ||
| + | [[Category: Abergel C]] | ||
| + | [[Category: Bernardi C]] | ||
| + | [[Category: Claverie JM]] | ||
| + | [[Category: Damonte G]] | ||
| + | [[Category: De Castro C]] | ||
| + | [[Category: Jeudy S]] | ||
| + | [[Category: Molinaro A]] | ||
| + | [[Category: Piacente F]] | ||
| + | [[Category: Salis A]] | ||
| + | [[Category: Tonetti M]] | ||
Current revision
Crystal structure of Megavirus UDP-GlcNAc 4,6-dehydratase, 5-epimerase Mg534
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Categories: Large Structures | Megavirus chiliensis | Abergel C | Bernardi C | Claverie JM | Damonte G | De Castro C | Jeudy S | Molinaro A | Piacente F | Salis A | Tonetti M
