4lf4
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==Crystal Structure of 30S ribosomal subunit from Thermus thermophilus== | ==Crystal Structure of 30S ribosomal subunit from Thermus thermophilus== | ||
| - | <StructureSection load='4lf4' size='340' side='right' caption='[[4lf4]], [[Resolution|resolution]] 3.34Å' scene=''> | + | <StructureSection load='4lf4' size='340' side='right'caption='[[4lf4]], [[Resolution|resolution]] 3.34Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4lf4]] is a | + | <table><tr><td colspan='2'>[[4lf4]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LF4 FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3421Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0TD:(3S)-3-(METHYLSULFANYL)-L-ASPARTIC+ACID'>0TD</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=4OC:4N,O2-METHYLCYTIDINE-5-MONOPHOSPHATE'>4OC</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=7MG:7N-METHYL-8-HYDROGUANOSINE-5-MONOPHOSPHATE'>7MG</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=LLL:(2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL'>LLL</scene>, <scene name='pdbligand=M2G:N2-DIMETHYLGUANOSINE-5-MONOPHOSPHATE'>M2G</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=UR3:3-METHYLURIDINE-5-MONOPHOSHATE'>UR3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lf4 OCA], [https://pdbe.org/4lf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lf4 RCSB], [https://www.ebi.ac.uk/pdbsum/4lf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lf4 ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RS4_THET8 RS4_THET8] One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the body and platform of the 30S subunit. Binds mRNA in the 70S ribosome, positioning it for translation.[HAMAP-Rule:MF_01306_B] | ||
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| + | ==See Also== | ||
| + | *[[Adenosine dimethyltransferase 3D structures|Adenosine dimethyltransferase 3D structures]] | ||
| + | *[[Ribosomal protein THX 3D structures|Ribosomal protein THX 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Thermus thermophilus]] | + | [[Category: Large Structures]] |
| - | [[Category: Belardinelli | + | [[Category: Thermus thermophilus HB8]] |
| - | [[Category: Carr | + | [[Category: Belardinelli R]] |
| - | [[Category: Dahlberg | + | [[Category: Carr J]] |
| - | [[Category: Demirci | + | [[Category: Dahlberg AE]] |
| - | [[Category: Gregory | + | [[Category: Demirci H]] |
| - | + | [[Category: Gregory ST]] | |
| - | [[Category: Jogl | + | [[Category: Jogl G]] |
| - | [[Category: | + | [[Category: Murphy IV F]] |
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Current revision
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
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