4qyk
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 4qyk is ON HOLD Authors: Lukk, T., Organtini, L.J., Hafenstein, S.U. Description: Crystal structure of a canine parvivirus variant) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of a canine parvovirus variant== | |
| + | <StructureSection load='4qyk' size='340' side='right'caption='[[4qyk]], [[Resolution|resolution]] 3.50Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4qyk]] is a 30 chain structure with sequence from [https://en.wikipedia.org/wiki/Feline_panleukopenia_virus Feline panleukopenia virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QYK FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qyk OCA], [https://pdbe.org/4qyk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qyk RCSB], [https://www.ebi.ac.uk/pdbsum/4qyk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qyk ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/P90456_FPV P90456_FPV] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Canine parvovirus (CPV-2) emerged in 1978 and spread worldwide within two years. Subsequently, CPV-2 was completely replaced by the variant CPV-2a, which is characterized by four specific capsid (VP2) mutations. The X-ray crystal structure of the CPV-2a capsid shows that each mutation confers small local changes. The loss of a hydrogen bond and introduction of a glycine residue likely introduce flexibility to sites that control interactions with the host receptor, antibodies, and sialic acids. | ||
| - | + | Global displacement of canine parvovirus by a host-adapted variant: A structural comparison between pandemic viruses with distinct host ranges.,Organtini LJ, Allison AB, Lukk T, Parrish CR, Hafenstein S J Virol. 2014 Nov 19. pii: JVI.02611-14. PMID:25410876<ref>PMID:25410876</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| + | </div> | ||
| + | <div class="pdbe-citations 4qyk" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Canine parvovirus|Canine parvovirus]] | ||
| + | *[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Feline panleukopenia virus]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Hafenstein SU]] | ||
| + | [[Category: Lukk T]] | ||
| + | [[Category: Organtini LJ]] | ||
Current revision
Crystal structure of a canine parvovirus variant
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