4d0q
From Proteopedia
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==Hyaluronan Binding Module of the Streptococcal Pneumoniae Hyaluronate Lyase== | ==Hyaluronan Binding Module of the Streptococcal Pneumoniae Hyaluronate Lyase== | ||
- | <StructureSection load='4d0q' size='340' side='right' caption='[[4d0q]], [[Resolution|resolution]] 1.20Å' scene=''> | + | <StructureSection load='4d0q' size='340' side='right'caption='[[4d0q]], [[Resolution|resolution]] 1.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4d0q]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D0Q OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[4d0q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D0Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D0Q FirstGlance]. <br> |
- | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2Å</td></tr> |
- | <tr><td class="sblockLbl"><b> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> |
- | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d0q OCA], [https://pdbe.org/4d0q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d0q RCSB], [https://www.ebi.ac.uk/pdbsum/4d0q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d0q ProSAT]</span></td></tr> |
- | <table> | + | </table> |
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/HYSA_STRPN HYSA_STRPN] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | For a subset of pathogenic microorganisms, including Streptococcus pneumoniae, the recognition and degradation of host hyaluronan contributes to bacterial spreading through the extracellular matrix and enhancing access to host-cell surfaces. The hyaluronate lyase, Hyl, presented on the surface of S. pneumoniae performs this role. Using glycan microarray screening, affinity electrophoresis, and isothermal titration calorimetry we show that the N-terminal module of Hyl is a hyaluronan-specific carbohydrate-binding module (CBM) and the founding member of CBM family 70. The 1.2 A resolution X-ray crystal structure of CBM70 revealed it to have a beta-sandwich fold similar to other CBMs. The electrostatic properties of the binding site, which was identified by site-directed mutagenesis, are distinct from other CBMs and complementary to its acidic ligand, hyaluronan. Dynamic light scattering and solution small-angle X-ray scattering (SAXS) revealed the full-length Hyl protein to exist as a monomer-dimer mixture in solution. Through a detailed analysis of the SAXS data we report the pseudo-atomic solution structures of the monomer and dimer forms of the full-length multimodular Hyl. | ||
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+ | Conformational analysis of the Streptococcus pneumoniae hyaluronate lyase and characterization of its hyaluronan-specific carbohydrate-binding module.,Suits MD, Pluvinage B, Law A, Liu Y, Palma AS, Chai W, Feizi T, Boraston AB J Biol Chem. 2014 Aug 6. pii: jbc.M114.578435. PMID:25100731<ref>PMID:25100731</ref> | ||
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+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 4d0q" style="background-color:#fffaf0;"></div> | ||
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+ | ==See Also== | ||
+ | *[[Hyaluronidase 3D structures|Hyaluronidase 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Boraston | + | [[Category: Streptococcus pneumoniae TIGR4]] |
- | [[Category: Chai | + | [[Category: Boraston AB]] |
- | [[Category: Feizi | + | [[Category: Chai W]] |
- | [[Category: Law | + | [[Category: Feizi T]] |
- | [[Category: Liu | + | [[Category: Law A]] |
- | [[Category: Palma | + | [[Category: Liu Y]] |
- | [[Category: Pluvinage | + | [[Category: Palma AS]] |
- | [[Category: Suits | + | [[Category: Pluvinage B]] |
- | + | [[Category: Suits MDL]] | |
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Current revision
Hyaluronan Binding Module of the Streptococcal Pneumoniae Hyaluronate Lyase
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