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4umv

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==CRYSTAL STRUCTURE OF A ZINC-TRANSPORTING PIB-TYPE ATPASE IN THE E2P STATE==
==CRYSTAL STRUCTURE OF A ZINC-TRANSPORTING PIB-TYPE ATPASE IN THE E2P STATE==
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<StructureSection load='4umv' size='340' side='right' caption='[[4umv]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
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<StructureSection load='4umv' size='340' side='right'caption='[[4umv]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4umv]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UMV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UMV FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4umv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_sonnei Shigella sonnei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UMV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UMV FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BEF:BERYLLIUM+TRIFLUORIDE+ION'>BEF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4umw|4umw]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEF:BERYLLIUM+TRIFLUORIDE+ION'>BEF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Zinc-exporting_ATPase Zinc-exporting ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.5 3.6.3.5] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4umv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4umv OCA], [https://pdbe.org/4umv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4umv RCSB], [https://www.ebi.ac.uk/pdbsum/4umv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4umv ProSAT]</span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4umv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4umv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4umv RCSB], [http://www.ebi.ac.uk/pdbsum/4umv PDBsum]</span></td></tr>
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</table>
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<table>
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== Function ==
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[https://www.uniprot.org/uniprot/ZNTA_SHISS ZNTA_SHISS] Confers resistance to zinc, cadmium and lead. Couples the hydrolysis of ATP with the export of zinc, cadmium or lead.<ref>PMID:25132545</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Zinc is an essential micronutrient for all living organisms. It is required for signalling and proper functioning of a range of proteins involved in, for example, DNA binding and enzymatic catalysis. In prokaryotes and photosynthetic eukaryotes, Zn2+-transporting P-type ATPases of class IB (ZntA) are crucial for cellular redistribution and detoxification of Zn2+ and related elements. Here we present crystal structures representing the phosphoenzyme ground state (E2P) and a dephosphorylation intermediate (E2.Pi) of ZntA from Shigella sonnei, determined at 3.2 A and 2.7 A resolution, respectively. The structures reveal a similar fold to Cu+-ATPases, with an amphipathic helix at the membrane interface. A conserved electronegative funnel connects this region to the intramembranous high-affinity ion-binding site and may promote specific uptake of cellular Zn2+ ions by the transporter. The E2P structure displays a wide extracellular release pathway reaching the invariant residues at the high-affinity site, including C392, C394 and D714. The pathway closes in the E2.Pi state, in which D714 interacts with the conserved residue K693, which possibly stimulates Zn2+ release as a built-in counter ion, as has been proposed for H+-ATPases. Indeed, transport studies in liposomes provide experimental support for ZntA activity without counter transport. These findings suggest a mechanistic link between PIB-type Zn2+-ATPases and PIII-type H+-ATPases and at the same time show structural features of the extracellular release pathway that resemble PII-type ATPases such as the sarcoplasmic/endoplasmic reticulum Ca2+-ATPase (SERCA) and Na+, K+-ATPase. These findings considerably increase our understanding of zinc transport in cells and represent new possibilities for biotechnology and biomedicine.
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Structure and mechanism of Zn-transporting P-type ATPases.,Wang K, Sitsel O, Meloni G, Autzen HE, Andersson M, Klymchuk T, Nielsen AM, Rees DC, Nissen P, Gourdon P Nature. 2014 Aug 17. doi: 10.1038/nature13618. PMID:25132545<ref>PMID:25132545</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4umv" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[ATPase 3D structures|ATPase 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Zinc-exporting ATPase]]
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[[Category: Large Structures]]
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[[Category: Andersson, M.]]
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[[Category: Shigella sonnei]]
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[[Category: Autzen, H E.]]
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[[Category: Andersson M]]
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[[Category: Gourdon, P.]]
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[[Category: Autzen HE]]
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[[Category: Klymchuk, T.]]
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[[Category: Gourdon P]]
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[[Category: Meloni, G.]]
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[[Category: Klymchuk T]]
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[[Category: Nielsen, A M.]]
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[[Category: Meloni G]]
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[[Category: Nissen, P.]]
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[[Category: Nielsen AM]]
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[[Category: Rees, D C.]]
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[[Category: Nissen P]]
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[[Category: Sitsel, O.]]
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[[Category: Rees DC]]
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[[Category: Wang, K T.]]
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[[Category: Sitsel O]]
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[[Category: Atp-binding]]
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[[Category: Wang KT]]
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[[Category: Cpc]]
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[[Category: Cxxc]]
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[[Category: Heavy-metal binding]]
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[[Category: Hydrolase]]
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[[Category: Ion transport]]
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[[Category: Membrane protein]]
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[[Category: Metal-binding]]
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[[Category: Nucleotide-binding]]
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[[Category: P-type atpase]]
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[[Category: Pi-atpase]]
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[[Category: Pib-atpase]]
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[[Category: Transmembrane]]
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[[Category: Transport]]
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[[Category: Zinc transport]]
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[[Category: Zn2+ exporting]]
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Current revision

CRYSTAL STRUCTURE OF A ZINC-TRANSPORTING PIB-TYPE ATPASE IN THE E2P STATE

PDB ID 4umv

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