4tqo
From Proteopedia
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- | '''Unreleased structure''' | ||
- | The | + | ==The crystal structure of methanol dehydrogenase from Methylococcus capsulatus (Bath)== |
+ | <StructureSection load='4tqo' size='340' side='right'caption='[[4tqo]], [[Resolution|resolution]] 2.57Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4tqo]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylococcus_capsulatus_str._Bath Methylococcus capsulatus str. Bath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TQO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TQO FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.57Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PQQ:PYRROLOQUINOLINE+QUINONE'>PQQ</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4tqo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tqo OCA], [https://pdbe.org/4tqo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4tqo RCSB], [https://www.ebi.ac.uk/pdbsum/4tqo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4tqo ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q60AR6_METCA Q60AR6_METCA] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | In the initial steps of their metabolic pathway, methanotrophic bacteria oxidize methane to methanol with methane monooxygenases (MMOs) and methanol to formaldehyde with methanol dehydrogenases (MDHs). Several lines of evidence suggest that the membrane-bound or particulate MMO (pMMO) and MDH interact to form a metabolic supercomplex. To further investigate the possible existence of such a supercomplex, native MDH from Methylococcus capsulatus (Bath) has been purified and characterized by size exclusion chromatography with multi-angle light scattering and X-ray crystallography. M. capsulatus (Bath) MDH is primarily a dimer in solution, although an oligomeric species with a molecular mass of approximately 450-560 kDa forms at higher protein concentrations. The 2.57 A resolution crystal structure reveals an overall fold and alpha2beta2 dimeric architecture similar to those of other MDH structures. In addition, biolayer interferometry studies demonstrate specific protein-protein interactions between MDH and M. capsulatus (Bath) pMMO as well as between MDH and the truncated recombinant periplasmic domains of M. capsulatus (Bath) pMMO (spmoB). These interactions exhibit KD values of 833 +/- 409 nM and 9.0 +/- 7.7 muM, respectively. The biochemical data combined with analysis of the crystal lattice interactions observed in the MDH structure suggest a model in which MDH and pMMO associate not as a discrete, stoichiometric complex but as a larger assembly scaffolded by the intracytoplasmic membranes. | ||
- | + | Structure and Protein-Protein Interactions of Methanol Dehydrogenase from Methylococcus capsulatus (Bath).,Culpepper MA, Rosenzweig AC Biochemistry. 2014 Oct 7;53(39):6211-9. doi: 10.1021/bi500850j. Epub 2014 Sep 19. PMID:25185034<ref>PMID:25185034</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
+ | </div> | ||
+ | <div class="pdbe-citations 4tqo" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Methanol dehydrogenase|Methanol dehydrogenase]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Methylococcus capsulatus str. Bath]] | ||
+ | [[Category: Culpepper MA]] | ||
+ | [[Category: Rosenzweig AC]] |
Current revision
The crystal structure of methanol dehydrogenase from Methylococcus capsulatus (Bath)
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