This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1e5z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:59, 20 March 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1e5z.jpg|left|200px]]
 
-
{{Structure
+
==Azurin from Pseudomonas aeruginosa, reduced form, pH 9.0==
-
|PDB= 1e5z |SIZE=350|CAPTION= <scene name='initialview01'>1e5z</scene>, resolution 2.00&Aring;
+
<StructureSection load='1e5z' size='340' side='right'caption='[[1e5z]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene> and <scene name='pdbligand=NO3:NITRATE ION'>NO3</scene>
+
<table><tr><td colspan='2'>[[1e5z]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E5Z FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5z OCA], [https://pdbe.org/1e5z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e5z RCSB], [https://www.ebi.ac.uk/pdbsum/1e5z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e5z ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AZUR_PSEAE AZUR_PSEAE] Transfers electrons from cytochrome c551 to cytochrome oxidase.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/1e5z_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e5z ConSurf].
 +
<div style="clear:both"></div>
-
'''AZURIN FROM PSEUDOMONAS AERUGINOSA, REDUCED FORM, PH 9.0'''
+
==See Also==
-
 
+
*[[Azurin 3D structures|Azurin 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1E5Z is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5Z OCA].
+
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Single protein]]
+
[[Category: Messerschmidt A]]
-
[[Category: Messerschmidt, A.]]
+
[[Category: Nar H]]
-
[[Category: Nar, H.]]
+
-
[[Category: CU]]
+
-
[[Category: NO3]]
+
-
[[Category: electron transport(copper binding)]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 10:50:17 2008''
+

Current revision

Azurin from Pseudomonas aeruginosa, reduced form, pH 9.0

PDB ID 1e5z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools