We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

4q10

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:26, 20 September 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==The catalytic core of Rad2 in complex with DNA substrate (complex IV)==
==The catalytic core of Rad2 in complex with DNA substrate (complex IV)==
-
<StructureSection load='4q10' size='340' side='right' caption='[[4q10]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='4q10' size='340' side='right'caption='[[4q10]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4q10]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q10 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Q10 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4q10]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q10 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q10 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4q0w|4q0w]], [[4q0z|4q0z]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4q10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q10 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4q10 RCSB], [http://www.ebi.ac.uk/pdbsum/4q10 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q10 OCA], [https://pdbe.org/4q10 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q10 RCSB], [https://www.ebi.ac.uk/pdbsum/4q10 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q10 ProSAT]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RAD2_YEAST RAD2_YEAST] Single-stranded DNA endonuclease involved in excision repair of DNA damaged with UV light, bulky adducts, or cross-linking agents. Essential for the incision step of excision-repair.<ref>PMID:8247134</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 4q10" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Jaciuk, M.]]
+
[[Category: Large Structures]]
-
[[Category: Kustosz, P.]]
+
[[Category: Saccharomyces cerevisiae S288C]]
-
[[Category: Mietus, M.]]
+
[[Category: Jaciuk M]]
-
[[Category: Nowak, E.]]
+
[[Category: Kustosz P]]
-
[[Category: Nowotny, M.]]
+
[[Category: Mietus M]]
-
[[Category: Ba rossmann-like]]
+
[[Category: Nowak E]]
-
[[Category: Dna repair]]
+
[[Category: Nowotny M]]
-
[[Category: Hydrolase-dna complex]]
+
-
[[Category: Nucleus]]
+
-
[[Category: Tfiih]]
+

Current revision

The catalytic core of Rad2 in complex with DNA substrate (complex IV)

PDB ID 4q10

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools