1mk4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:44, 14 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of Protein of Unknown Function YqjY from Bacillus subtilis, Probable Acetyltransferase==
==Structure of Protein of Unknown Function YqjY from Bacillus subtilis, Probable Acetyltransferase==
-
<StructureSection load='1mk4' size='340' side='right' caption='[[1mk4]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='1mk4' size='340' side='right'caption='[[1mk4]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1mk4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1MK4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1mk4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MK4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MK4 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1i1d|1i1d]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YQJY ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mk4 OCA], [https://pdbe.org/1mk4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mk4 RCSB], [https://www.ebi.ac.uk/pdbsum/1mk4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mk4 ProSAT], [https://www.topsan.org/Proteins/MCSG/1mk4 TOPSAN]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1mk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mk4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1mk4 RCSB], [http://www.ebi.ac.uk/pdbsum/1mk4 PDBsum], [http://www.topsan.org/Proteins/MCSG/1mk4 TOPSAN]</span></td></tr>
+
</table>
-
<table>
+
== Function ==
 +
[https://www.uniprot.org/uniprot/YQJY_BACSU YQJY_BACSU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mk/1mk4_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mk/1mk4_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mk4 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Collart, F.]]
+
[[Category: Large Structures]]
-
[[Category: Dementiva, I.]]
+
[[Category: Collart F]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Dementiva I]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Joachimiak A]]
-
[[Category: Mo, A.]]
+
[[Category: Mo A]]
-
[[Category: Zhang, R.]]
+
[[Category: Zhang R]]
-
[[Category: Alpha-beta-alpha sandwich]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Structure of Protein of Unknown Function YqjY from Bacillus subtilis, Probable Acetyltransferase

PDB ID 1mk4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools