This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ldo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:50, 7 December 2022) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution structure of triheme cytochrome PpcA from Geobacter sulfurreducens reveals the structural origin of the redox-Bohr effect==
==Solution structure of triheme cytochrome PpcA from Geobacter sulfurreducens reveals the structural origin of the redox-Bohr effect==
-
<StructureSection load='2ldo' size='340' side='right' caption='[[2ldo]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2ldo' size='340' side='right'caption='[[2ldo]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ldo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacter_sulfurreducens Geobacter sulfurreducens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LDO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LDO FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ldo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_sulfurreducens Geobacter sulfurreducens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LDO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LDO FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene><br>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GSU0612, ppcA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=35554 Geobacter sulfurreducens])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ldo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ldo OCA], [https://pdbe.org/2ldo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ldo RCSB], [https://www.ebi.ac.uk/pdbsum/2ldo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ldo ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ldo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ldo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ldo RCSB], [http://www.ebi.ac.uk/pdbsum/2ldo PDBsum]</span></td></tr>
+
</table>
-
<table>
+
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8GGK7_GEOSN Q8GGK7_GEOSN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 15: Line 17:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2ldo" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Cytochrome c|Cytochrome c]]
+
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 23: Line 26:
</StructureSection>
</StructureSection>
[[Category: Geobacter sulfurreducens]]
[[Category: Geobacter sulfurreducens]]
-
[[Category: Bruix, M.]]
+
[[Category: Large Structures]]
-
[[Category: Morgado, L.]]
+
[[Category: Bruix M]]
-
[[Category: Paixao, V B.]]
+
[[Category: Morgado L]]
-
[[Category: Salgueiro, C A.]]
+
[[Category: Paixao VB]]
-
[[Category: Electron transfer]]
+
[[Category: Salgueiro CA]]
-
[[Category: Electron transport]]
+

Current revision

Solution structure of triheme cytochrome PpcA from Geobacter sulfurreducens reveals the structural origin of the redox-Bohr effect

PDB ID 2ldo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools