This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2b7h
From Proteopedia
(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Hemoglobin from Cerdocyon thous, a canidae from Brazil, at 2.2 Angstroms resolution== | ==Hemoglobin from Cerdocyon thous, a canidae from Brazil, at 2.2 Angstroms resolution== | ||
| - | <StructureSection load='2b7h' size='340' side='right' caption='[[2b7h]], [[Resolution|resolution]] 2.20Å' scene=''> | + | <StructureSection load='2b7h' size='340' side='right'caption='[[2b7h]], [[Resolution|resolution]] 2.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2b7h]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2b7h]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Cerdocyon_thous Cerdocyon thous]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B7H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B7H FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b7h OCA], [https://pdbe.org/2b7h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b7h RCSB], [https://www.ebi.ac.uk/pdbsum/2b7h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b7h ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/HBA_CHRBR HBA_CHRBR] Involved in oxygen transport from the lung to the various peripheral tissues. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b7/2b7h_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b7/2b7h_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b7h ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| Line 22: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Dusicyon thous]] | ||
| - | [[Category: Barbosa, J A.R G.]] | ||
| - | [[Category: Bloch, C.]] | ||
| - | [[Category: Esteves, G F.]] | ||
| - | [[Category: Freitas, S M.]] | ||
| - | [[Category: Medrano, F J.]] | ||
| - | [[Category: Silva, V C.]] | ||
| - | [[Category: Aquomet]] | ||
[[Category: Cerdocyon thous]] | [[Category: Cerdocyon thous]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Barbosa JARG]] |
| + | [[Category: Bloch Jr C]] | ||
| + | [[Category: Esteves GF]] | ||
| + | [[Category: Freitas SM]] | ||
| + | [[Category: Medrano FJ]] | ||
| + | [[Category: Silva VC]] | ||
Current revision
Hemoglobin from Cerdocyon thous, a canidae from Brazil, at 2.2 Angstroms resolution
| |||||||||||
