This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2j37
From Proteopedia
(Difference between revisions)
| (7 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS== | ==MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS== | ||
| - | < | + | <SX load='2j37' size='340' side='right' viewer='molstar' caption='[[2j37]], [[Resolution|resolution]] 8.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [https://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J37 FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 8Å</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [https://pdbe.org/2j37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [https://www.ebi.ac.uk/pdbsum/2j37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j37 ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O81229_MAIZE O81229_MAIZE] Binds to 23S rRNA.[ARBA:ARBA00002500] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j3/2j37_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j3/2j37_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j37 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 24: | Line 27: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2j37" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| Line 29: | Line 33: | ||
*[[Ribosomal protein L31|Ribosomal protein L31]] | *[[Ribosomal protein L31|Ribosomal protein L31]] | ||
*[[Ribosomal protein L35|Ribosomal protein L35]] | *[[Ribosomal protein L35|Ribosomal protein L35]] | ||
| - | *[[Signal recognition particle | + | *[[Signal recognition particle 3D structures|Signal recognition particle 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
| - | </ | + | </SX> |
| - | [[Category: Canis sp | + | [[Category: Canis sp]] |
[[Category: Haloarcula marismortui]] | [[Category: Haloarcula marismortui]] | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: Triticum sp | + | [[Category: Large Structures]] |
| - | [[Category: Becker | + | [[Category: Triticum sp]] |
| - | [[Category: Beckmann | + | [[Category: Becker T]] |
| - | [[Category: Blau | + | [[Category: Beckmann R]] |
| - | [[Category: Halic | + | [[Category: Blau M]] |
| - | [[Category: Mielke | + | [[Category: Halic M]] |
| - | [[Category: Pool | + | [[Category: Mielke T]] |
| - | [[Category: Sinning | + | [[Category: Pool MR]] |
| - | [[Category: Wild | + | [[Category: Sinning I]] |
| - | + | [[Category: Wild K]] | |
| - | + | ||
| - | + | ||
Current revision
MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS
| |||||||||
Categories: Canis sp | Haloarcula marismortui | Homo sapiens | Large Structures | Triticum sp | Becker T | Beckmann R | Blau M | Halic M | Mielke T | Pool MR | Sinning I | Wild K

