2ohw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:19, 28 December 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of the YueI protein from Bacillus subtilis==
==Crystal structure of the YueI protein from Bacillus subtilis==
-
<StructureSection load='2ohw' size='340' side='right' caption='[[2ohw]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
+
<StructureSection load='2ohw' size='340' side='right'caption='[[2ohw]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ohw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OHW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OHW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ohw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OHW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OHW FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yueI ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ohw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ohw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ohw RCSB], [http://www.ebi.ac.uk/pdbsum/2ohw PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ohw TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ohw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ohw OCA], [https://pdbe.org/2ohw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ohw RCSB], [https://www.ebi.ac.uk/pdbsum/2ohw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ohw ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ohw TOPSAN]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YUEI_BACSU YUEI_BACSU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oh/2ohw_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oh/2ohw_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ohw ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Almo, S C.]]
+
[[Category: Large Structures]]
-
[[Category: Bain, K T.]]
+
[[Category: Almo SC]]
-
[[Category: Bonanno, J B.]]
+
[[Category: Bain KT]]
-
[[Category: Burley, S K.]]
+
[[Category: Bonanno JB]]
-
[[Category: Chen, T.]]
+
[[Category: Burley SK]]
-
[[Category: Dickey, M.]]
+
[[Category: Chen T]]
-
[[Category: Jin, X.]]
+
[[Category: Dickey M]]
-
[[Category: Mu, H.]]
+
[[Category: Jin X]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Mu H]]
-
[[Category: Reyes, C.]]
+
[[Category: Reyes C]]
-
[[Category: Sauder, J M.]]
+
[[Category: Sauder JM]]
-
[[Category: Smith, D.]]
+
[[Category: Smith D]]
-
[[Category: Wasserman, S.]]
+
[[Category: Wasserman S]]
-
[[Category: Wu, B.]]
+
[[Category: Wu B]]
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of the YueI protein from Bacillus subtilis

PDB ID 2ohw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools