This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3bew
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==10mer Crystal Structure of chicken MHC class I haplotype B21== | ==10mer Crystal Structure of chicken MHC class I haplotype B21== | ||
| - | <StructureSection load='3bew' size='340' side='right' caption='[[3bew]], [[Resolution|resolution]] 2.60Å' scene=''> | + | <StructureSection load='3bew' size='340' side='right'caption='[[3bew]], [[Resolution|resolution]] 2.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3bew]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3bew]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BEW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BEW FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bew FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bew OCA], [https://pdbe.org/3bew PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bew RCSB], [https://www.ebi.ac.uk/pdbsum/3bew PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bew ProSAT]</span></td></tr> | |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </table> |
| - | <table> | + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q95601_CHICK Q95601_CHICK] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/3bew_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/3bew_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bew ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 25: | Line 27: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3bew" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Beta-2 microglobulin|Beta-2 microglobulin]] | + | *[[Beta-2 microglobulin 3D structures|Beta-2 microglobulin 3D structures]] |
| - | *[[ | + | *[[MHC 3D structures|MHC 3D structures]] |
| + | *[[MHC I 3D structures|MHC I 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
| Line 34: | Line 38: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Gallus gallus]] | [[Category: Gallus gallus]] | ||
| - | [[Category: Avila | + | [[Category: Large Structures]] |
| - | [[Category: Camp | + | [[Category: Avila D]] |
| - | [[Category: Cerundolo | + | [[Category: Camp S]] |
| - | [[Category: Collen | + | [[Category: Cerundolo V]] |
| - | [[Category: Dunbar | + | [[Category: Collen T]] |
| - | + | [[Category: Dunbar PR]] | |
| - | [[Category: Hunt | + | [[Category: Hunt L]] |
| - | [[Category: Jacob | + | [[Category: Jacob JP]] |
| - | [[Category: Johnston | + | [[Category: Johnston F]] |
| - | [[Category: Jones | + | [[Category: Jones EY]] |
| - | [[Category: Kaufman | + | [[Category: Kaufman J]] |
| - | [[Category: Koch | + | [[Category: Koch M]] |
| - | [[Category: Marston | + | [[Category: Marston DA]] |
| - | [[Category: Salomonsen | + | [[Category: Salomonsen J]] |
| - | [[Category: Shaw | + | [[Category: Shaw I]] |
| - | [[Category: Wallny | + | [[Category: Wallny HJ]] |
| - | [[Category: | + | [[Category: Van Hateren A]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
10mer Crystal Structure of chicken MHC class I haplotype B21
| |||||||||||
Categories: Gallus gallus | Large Structures | Avila D | Camp S | Cerundolo V | Collen T | Dunbar PR | Hunt L | Jacob JP | Johnston F | Jones EY | Kaufman J | Koch M | Marston DA | Salomonsen J | Shaw I | Wallny HJ | Van Hateren A

