3fdc

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==Crystal Structure of Avidin==
==Crystal Structure of Avidin==
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<StructureSection load='3fdc' size='340' side='right' caption='[[3fdc]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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<StructureSection load='3fdc' size='340' side='right'caption='[[3fdc]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3fdc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FDC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FDC FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3fdc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FDC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FDC FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BTF:IRON(II)+TETRACYANO-5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC+ACID+(4-METHYL-[2,2]BIPYRIDINYL-4-YLMETHYL)-AMIDE'>BTF</scene><br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fdc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fdc RCSB], [http://www.ebi.ac.uk/pdbsum/3fdc PDBsum]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BTF:IRON(II)+TETRACYANO-5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC+ACID+(4-METHYL-[2,2]BIPYRIDINYL-4-YLMETHYL)-AMIDE'>BTF</scene></td></tr>
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<table>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fdc OCA], [https://pdbe.org/3fdc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fdc RCSB], [https://www.ebi.ac.uk/pdbsum/3fdc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fdc ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/AVID_CHICK AVID_CHICK] The biological function of avidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of avidin).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/3fdc_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/3fdc_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fdc ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 3fdc" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
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*[[Avidin|Avidin]]
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*[[Avidin 3D structures|Avidin 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
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[[Category: Abajian, C.]]
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[[Category: Large Structures]]
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[[Category: Barker, K D.]]
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[[Category: Abajian C]]
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[[Category: Eckermann, A L.]]
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[[Category: Barker KD]]
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[[Category: Hartings, M R.]]
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[[Category: Eckermann AL]]
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[[Category: Meade, T J.]]
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[[Category: Hartings MR]]
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[[Category: Rosenzweig, A C.]]
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[[Category: Meade TJ]]
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[[Category: Sazinsky, M H.]]
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[[Category: Rosenzweig AC]]
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[[Category: Beta barrel]]
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[[Category: Sazinsky MH]]
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[[Category: Biotin]]
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[[Category: Glycoprotein]]
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[[Category: Protein binding]]
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[[Category: Secreted]]
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Current revision

Crystal Structure of Avidin

PDB ID 3fdc

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