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3kwx
From Proteopedia
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==Chemically modified Taka alpha-amylase== | ==Chemically modified Taka alpha-amylase== | ||
| - | <StructureSection load='3kwx' size='340' side='right' caption='[[3kwx]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='3kwx' size='340' side='right'caption='[[3kwx]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3kwx]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3kwx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_oryzae Aspergillus oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KWX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KWX FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
| - | <tr><td class="sblockLbl"><b> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kwx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kwx OCA], [https://pdbe.org/3kwx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kwx RCSB], [https://www.ebi.ac.uk/pdbsum/3kwx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kwx ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/AMYA1_ASPOR AMYA1_ASPOR] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kwx_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kw/3kwx_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kwx ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Amylase|Amylase]] | + | *[[Amylase 3D structures|Amylase 3D structures]] |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Alpha-amylase]] | ||
[[Category: Aspergillus oryzae]] | [[Category: Aspergillus oryzae]] | ||
| - | [[Category: Burg | + | [[Category: Large Structures]] |
| - | [[Category: Cavicchioli | + | [[Category: Burg D]] |
| - | [[Category: Francisci | + | [[Category: Cavicchioli R]] |
| - | [[Category: Guerriero | + | [[Category: De Francisci D]] |
| - | [[Category: Harrop | + | [[Category: Guerriero G]] |
| - | [[Category: Parkin | + | [[Category: Harrop SJ]] |
| - | [[Category: Pilak | + | [[Category: Parkin DM]] |
| - | [[Category: Poljak | + | [[Category: Pilak O]] |
| - | [[Category: Raftery | + | [[Category: Poljak A]] |
| - | [[Category: Siddiqui | + | [[Category: Raftery MJ]] |
| - | [[Category: Trewhella | + | [[Category: Siddiqui KS]] |
| - | + | [[Category: Trewhella J]] | |
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Current revision
Chemically modified Taka alpha-amylase
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