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3i5h
From Proteopedia
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==The crystal structure of rigor like squid myosin S1 in the absence of nucleotide== | ==The crystal structure of rigor like squid myosin S1 in the absence of nucleotide== | ||
| - | <StructureSection load='3i5h' size='340' side='right' caption='[[3i5h]], [[Resolution|resolution]] 3.40Å' scene=''> | + | <StructureSection load='3i5h' size='340' side='right'caption='[[3i5h]], [[Resolution|resolution]] 3.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3i5h]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3i5h]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Doryteuthis_pealeii Doryteuthis pealeii] and [https://en.wikipedia.org/wiki/Todarodes_pacificus Todarodes pacificus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2ekv 2ekv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I5H FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.4Å</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i5h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5h OCA], [https://pdbe.org/3i5h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i5h RCSB], [https://www.ebi.ac.uk/pdbsum/3i5h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5h ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O44934_DORPE O44934_DORPE] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/3i5h_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/3i5h_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i5h ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3i5h" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Myosin|Myosin]] | + | *[[Myosin 3D Structures|Myosin 3D Structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Doryteuthis pealeii]] | [[Category: Doryteuthis pealeii]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Todarodes pacificus]] | [[Category: Todarodes pacificus]] | ||
| - | [[Category: Brown | + | [[Category: Brown JH]] |
| - | [[Category: Cohen | + | [[Category: Cohen C]] |
| - | [[Category: Gourinath | + | [[Category: Gourinath S]] |
| - | [[Category: Himmel | + | [[Category: Himmel DM]] |
| - | [[Category: Kovacs | + | [[Category: Kovacs M]] |
| - | [[Category: | + | [[Category: Nyitray L]] |
| - | [[Category: | + | [[Category: O'Neall-Hennessey E]] |
| - | [[Category: Reshetnikova | + | [[Category: Reshetnikova L]] |
| - | [[Category: Reutzel | + | [[Category: Reutzel R]] |
| - | [[Category: Szent-Gyorgyi | + | [[Category: Szent-Gyorgyi AG]] |
| - | [[Category: Yang | + | [[Category: Yang Y]] |
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Current revision
The crystal structure of rigor like squid myosin S1 in the absence of nucleotide
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