This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3k4u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:26, 1 November 2017) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==CRYSTAL STRUCTURE OF putative binding component of ABC transporter from Wolinella succinogenes DSM 1740 complexed with lysine==
==CRYSTAL STRUCTURE OF putative binding component of ABC transporter from Wolinella succinogenes DSM 1740 complexed with lysine==
<StructureSection load='3k4u' size='340' side='right' caption='[[3k4u]], [[Resolution|resolution]] 2.62&Aring;' scene=''>
<StructureSection load='3k4u' size='340' side='right' caption='[[3k4u]], [[Resolution|resolution]] 2.62&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3k4u]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Wolinella_succinogenes Wolinella succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K4U FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3k4u]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_29543 Atcc 29543]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K4U FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LYS:LYSINE'>LYS</scene><br>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LYS:LYSINE'>LYS</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CAE09431.1, WS0279 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=844 Wolinella succinogenes])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CAE09431.1, WS0279 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=844 ATCC 29543])</td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k4u OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3k4u RCSB], [http://www.ebi.ac.uk/pdbsum/3k4u PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k4u OCA], [http://pdbe.org/3k4u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k4u RCSB], [http://www.ebi.ac.uk/pdbsum/3k4u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3k4u ProSAT]</span></td></tr>
-
<table>
+
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 17:
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k4u ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
- 
-
==See Also==
 
-
*[[ABC transporter|ABC transporter]]
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Wolinella succinogenes]]
+
[[Category: Atcc 29543]]
-
[[Category: Almo, S C.]]
+
[[Category: Almo, S C]]
-
[[Category: Burley, S K.]]
+
[[Category: Burley, S K]]
-
[[Category: Malashkevich, V N.]]
+
[[Category: Malashkevich, V N]]
-
[[Category: Morano, C.]]
+
[[Category: Morano, C]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
-
[[Category: Sauder, J M.]]
+
-
[[Category: Toro, R.]]
+
-
[[Category: Abc transporter]]
+
-
[[Category: Crystal structure]]
+
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: New york structural genomix research consortium]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
[[Category: Structural genomic]]
[[Category: Structural genomic]]
 +
[[Category: Sauder, J M]]
 +
[[Category: Toro, R]]
 +
[[Category: Abc transporter]]
 +
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
 +
[[Category: PSI, Protein structure initiative]]
[[Category: Transport protein]]
[[Category: Transport protein]]

Current revision

CRYSTAL STRUCTURE OF putative binding component of ABC transporter from Wolinella succinogenes DSM 1740 complexed with lysine

3k4u, resolution 2.62Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools