This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1gqo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:23, 27 March 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1gqo.gif|left|200px]]
 
-
{{Structure
+
==Type II Dehydroquinase from Bacillus subtilis==
-
|PDB= 1gqo |SIZE=350|CAPTION= <scene name='initialview01'>1gqo</scene>, resolution 2.10&Aring;
+
<StructureSection load='1gqo' size='340' side='right'caption='[[1gqo]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
<table><tr><td colspan='2'>[[1gqo]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GQO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GQO FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
|GENE= YQHS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gqo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gqo OCA], [https://pdbe.org/1gqo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gqo RCSB], [https://www.ebi.ac.uk/pdbsum/1gqo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gqo ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AROQ_BACSU AROQ_BACSU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/1gqo_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gqo ConSurf].
 +
<div style="clear:both"></div>
-
'''TYPE II DEHYDROQUINASE FROM BACILLUS SUBTILIS'''
+
==See Also==
-
 
+
*[[Dehydroquinase 3D structures|Dehydroquinase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1GQO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GQO OCA].
+
-
[[Category: 3-dehydroquinate dehydratase]]
+
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Coggins, J R.]]
+
[[Category: Coggins JR]]
-
[[Category: Lapthorn, A J.]]
+
[[Category: Lapthorn AJ]]
-
[[Category: Robinson, D A.]]
+
[[Category: Robinson DA]]
-
[[Category: Roszak, A W.]]
+
[[Category: Roszak AW]]
-
[[Category: GOL]]
+
-
[[Category: dehydratase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 11:26:42 2008''
+

Current revision

Type II Dehydroquinase from Bacillus subtilis

PDB ID 1gqo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools