3nla

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:46, 22 May 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==NMR STRUCTURE OF THE N-TERMINAL DOMAIN WITH A LINKER PORTION OF ANTARCTIC EEL POUT ANTIFREEZE PROTEIN RD3, 40 STRUCTURES==
==NMR STRUCTURE OF THE N-TERMINAL DOMAIN WITH A LINKER PORTION OF ANTARCTIC EEL POUT ANTIFREEZE PROTEIN RD3, 40 STRUCTURES==
-
<StructureSection load='3nla' size='340' side='right' caption='[[3nla]], [[NMR_Ensembles_of_Models | 40 NMR models]]' scene=''>
+
<StructureSection load='3nla' size='340' side='right'caption='[[3nla]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3nla]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lycodichthys_dearborni Lycodichthys dearborni]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NLA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NLA FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3nla]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lycodichthys_dearborni Lycodichthys dearborni]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NLA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NLA FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nla OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nla RCSB], [http://www.ebi.ac.uk/pdbsum/3nla PDBsum]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<table>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nla OCA], [https://pdbe.org/3nla PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nla RCSB], [https://www.ebi.ac.uk/pdbsum/3nla PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nla ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ANP3_LYCDA ANP3_LYCDA] Contributes to protect fish blood from freezing at subzero sea water temperatures. Lowers the blood freezing point. Binds to nascent ice crystals and prevents further growth (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nl/3nla_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nl/3nla_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nla ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 23: Line 27:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3nla" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Antifreeze protein|Antifreeze protein]]
+
*[[Antifreeze protein 3D structures|Antifreeze protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Lycodichthys dearborni]]
[[Category: Lycodichthys dearborni]]
-
[[Category: Hikichi, K.]]
+
[[Category: Hikichi K]]
-
[[Category: Hoshino, T.]]
+
[[Category: Hoshino T]]
-
[[Category: Miura, K.]]
+
[[Category: Miura K]]
-
[[Category: Nemoto, N.]]
+
[[Category: Nemoto N]]
-
[[Category: Ohgiya, S.]]
+
[[Category: Ohgiya S]]
-
[[Category: Tsuda, S.]]
+
[[Category: Tsuda S]]
-
[[Category: Antifreeze]]
+
-
[[Category: Antifreeze protein]]
+
-
[[Category: Ice binding protein]]
+
-
[[Category: Thermal hysteresis protein]]
+

Current revision

NMR STRUCTURE OF THE N-TERMINAL DOMAIN WITH A LINKER PORTION OF ANTARCTIC EEL POUT ANTIFREEZE PROTEIN RD3, 40 STRUCTURES

PDB ID 3nla

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools