1ogp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:39, 13 December 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
==THE CRYSTAL STRUCTURE OF PLANT SULFITE OXIDASE PROVIDES INSIGHT INTO SULFITE OXIDATION IN PLANTS AND ANIMALS==
+
 
-
<StructureSection load='1ogp' size='340' side='right' caption='[[1ogp]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
==The crystal structure of plant sulfite oxidase provides insight into sulfite oxidation in plants and animals==
 +
<StructureSection load='1ogp' size='340' side='right'caption='[[1ogp]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OGP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OGP FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [http://www.ebi.ac.uk/pdbsum/1ogp PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [https://pdbe.org/1ogp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [https://www.ebi.ac.uk/pdbsum/1ogp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ogp ProSAT]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SUOX_ARATH SUOX_ARATH] Probably involved in sulfite oxidative detoxification.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/og/1ogp_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/og/1ogp_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ogp ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 28:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 1ogp" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
Line 33: Line 37:
</StructureSection>
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
-
[[Category: Sulfite oxidase]]
+
[[Category: Large Structures]]
-
[[Category: Fischer, K.]]
+
[[Category: Fischer K]]
-
[[Category: Kisker, C.]]
+
[[Category: Kisker C]]
-
[[Category: Mendel, R R.]]
+
[[Category: Mendel RR]]
-
[[Category: Schrader, N.]]
+
[[Category: Schrader N]]
-
[[Category: Schwarz, G.]]
+
[[Category: Schwarz G]]
-
[[Category: Theis, K.]]
+
[[Category: Theis K]]
-
[[Category: Intramolecular electron transfer]]
+
-
[[Category: Molybdenum cofactor]]
+
-
[[Category: Molybdopterin]]
+
-
[[Category: Oxidoreducta]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peroxisome]]
+
-
[[Category: Plant sulfite oxidase]]
+

Current revision

The crystal structure of plant sulfite oxidase provides insight into sulfite oxidation in plants and animals

PDB ID 1ogp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools