1yez

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:37, 1 May 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution structure of the conserved protein from the gene locus MM1357 of Methanosarcina mazei. Northeast Structural Genomics target MaR30.==
==Solution structure of the conserved protein from the gene locus MM1357 of Methanosarcina mazei. Northeast Structural Genomics target MaR30.==
-
<StructureSection load='1yez' size='340' side='right' caption='[[1yez]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''>
+
<StructureSection load='1yez' size='340' side='right'caption='[[1yez]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1yez]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YEZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YEZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1yez]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_mazei_Go1 Methanosarcina mazei Go1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YEZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YEZ FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Locus MM1357 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2209 Methanosarcina mazei])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yez OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yez RCSB], [http://www.ebi.ac.uk/pdbsum/1yez PDBsum], [http://www.topsan.org/Proteins/NESGC/1yez TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yez OCA], [https://pdbe.org/1yez PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yez RCSB], [https://www.ebi.ac.uk/pdbsum/1yez PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yez ProSAT], [https://www.topsan.org/Proteins/NESGC/1yez TOPSAN]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8PX65_METMA Q8PX65_METMA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ye/1yez_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ye/1yez_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yez ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Methanosarcina mazei]]
+
[[Category: Large Structures]]
-
[[Category: Acton, T B.]]
+
[[Category: Methanosarcina mazei Go1]]
-
[[Category: Aramini, J M.]]
+
[[Category: Acton TB]]
-
[[Category: Ho, C K.]]
+
[[Category: Aramini JM]]
-
[[Category: Huang, Y P.]]
+
[[Category: Ho CK]]
-
[[Category: Ma, L C.]]
+
[[Category: Huang YP]]
-
[[Category: Montelione, G T.]]
+
[[Category: Ma LC]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Montelione GT]]
-
[[Category: Rossi, P.]]
+
[[Category: Rossi P]]
-
[[Category: Swapna, G V.T.]]
+
[[Category: Swapna GVT]]
-
[[Category: Xiao, R.]]
+
[[Category: Xiao R]]
-
[[Category: Autostructure]]
+
-
[[Category: Mar30]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomic]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Solution structure of the conserved protein from the gene locus MM1357 of Methanosarcina mazei. Northeast Structural Genomics target MaR30.

PDB ID 1yez

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools