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1yd7
From Proteopedia
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==Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus== | ==Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus== | ||
| - | <StructureSection load='1yd7' size='340' side='right' caption='[[1yd7]], [[Resolution|resolution]] 2.30Å' scene=''> | + | <StructureSection load='1yd7' size='340' side='right'caption='[[1yd7]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1yd7]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1yd7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YD7 FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yd7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yd7 OCA], [https://pdbe.org/1yd7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yd7 RCSB], [https://www.ebi.ac.uk/pdbsum/1yd7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yd7 ProSAT], [https://www.topsan.org/Proteins/SECSG/1yd7 TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8U046_PYRFU Q8U046_PYRFU] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1yd7_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1yd7_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yd7 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Pyrococcus furiosus]] | [[Category: Pyrococcus furiosus]] | ||
| - | [[Category: Adams | + | [[Category: Adams MWW]] |
| - | [[Category: Chang | + | [[Category: Chang J]] |
| - | [[Category: Chang | + | [[Category: Chang S-H]] |
| - | [[Category: Chen | + | [[Category: Chen L]] |
| - | [[Category: Florence | + | [[Category: Florence Q]] |
| - | [[Category: Habel | + | [[Category: Habel J]] |
| - | [[Category: Horanyi | + | [[Category: Horanyi P]] |
| - | [[Category: Jenney | + | [[Category: Jenney Jr FE]] |
| - | [[Category: Lee | + | [[Category: Lee D]] |
| - | [[Category: Lin | + | [[Category: Lin D]] |
| - | [[Category: Liu | + | [[Category: Liu Z-J]] |
| - | [[Category: Nguyen | + | [[Category: Nguyen D]] |
| - | [[Category: Praissman | + | [[Category: Praissman J]] |
| - | [[Category: Rose | + | [[Category: Rose JP]] |
| - | + | [[Category: Tempel W]] | |
| - | [[Category: Tempel | + | [[Category: Wang B-C]] |
| - | [[Category: Wang | + | [[Category: Xu H]] |
| - | [[Category: Xu | + | [[Category: Zhang H]] |
| - | [[Category: Zhang | + | [[Category: Zhao M]] |
| - | [[Category: Zhao | + | [[Category: Zhou W]] |
| - | [[Category: Zhou | + | |
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Current revision
Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus
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Categories: Large Structures | Pyrococcus furiosus | Adams MWW | Chang J | Chang S-H | Chen L | Florence Q | Habel J | Horanyi P | Jenney Jr FE | Lee D | Lin D | Liu Z-J | Nguyen D | Praissman J | Rose JP | Tempel W | Wang B-C | Xu H | Zhang H | Zhao M | Zhou W
