This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2bz7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:59, 13 December 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
==OXIDIZED AND REDUCED STRUCTURES OF A MUTANT PLASTOCYANIN OF FERN==
+
 
-
<StructureSection load='2bz7' size='340' side='right' caption='[[2bz7]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
+
==Oxidized and reduced structures of a mutant Plastocyanin of fern==
 +
<StructureSection load='2bz7' size='340' side='right'caption='[[2bz7]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2bz7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Dryopteris_crassirhizoma Dryopteris crassirhizoma]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BZ7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BZ7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2bz7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dryopteris_crassirhizoma Dryopteris crassirhizoma]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BZ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BZ7 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1kdi|1kdi]], [[1kdj|1kdj]], [[2bzc|2bzc]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bz7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bz7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bz7 RCSB], [http://www.ebi.ac.uk/pdbsum/2bz7 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bz7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bz7 OCA], [https://pdbe.org/2bz7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bz7 RCSB], [https://www.ebi.ac.uk/pdbsum/2bz7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bz7 ProSAT]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PLAS_DRYCA PLAS_DRYCA] Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bz/2bz7_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bz/2bz7_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bz7 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 28:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2bz7" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Plastocyanin 3D structures|Plastocyanin 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 30: Line 37:
</StructureSection>
</StructureSection>
[[Category: Dryopteris crassirhizoma]]
[[Category: Dryopteris crassirhizoma]]
-
[[Category: Hulsker, R.]]
+
[[Category: Large Structures]]
-
[[Category: Thomassen, E A.J.]]
+
[[Category: Hulsker R]]
-
[[Category: Ubbink, M.]]
+
[[Category: Thomassen EAJ]]
-
[[Category: Electron transport]]
+
[[Category: Ubbink M]]
-
[[Category: Fern]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Thylakoid]]
+
-
[[Category: Transport]]
+

Current revision

Oxidized and reduced structures of a mutant Plastocyanin of fern

PDB ID 2bz7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools