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2f6k
From Proteopedia
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==Crystal Structure of Amidohydrorolase II; Northeast Structural Genomics Target LpR24== | ==Crystal Structure of Amidohydrorolase II; Northeast Structural Genomics Target LpR24== | ||
| - | <StructureSection load='2f6k' size='340' side='right' caption='[[2f6k]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='2f6k' size='340' side='right'caption='[[2f6k]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2f6k]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2f6k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lacpl Lacpl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F6K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F6K FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Aminocarboxymuconate-semialdehyde_decarboxylase Aminocarboxymuconate-semialdehyde decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.45 4.1.1.45] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f6k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f6k OCA], [https://pdbe.org/2f6k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f6k RCSB], [https://www.ebi.ac.uk/pdbsum/2f6k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f6k ProSAT], [https://www.topsan.org/Proteins/NESGC/2f6k TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f6/2f6k_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f6/2f6k_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f6k ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Aminocarboxymuconate-semialdehyde decarboxylase]] | [[Category: Aminocarboxymuconate-semialdehyde decarboxylase]] | ||
| - | [[Category: | + | [[Category: Lacpl]] |
| - | [[Category: Acton, T | + | [[Category: Large Structures]] |
| - | [[Category: Arnold, E | + | [[Category: Acton, T]] |
| - | [[Category: Das, K | + | [[Category: Arnold, E]] |
| - | [[Category: Ma, L | + | [[Category: Das, K]] |
| - | [[Category: Montelione, G T | + | [[Category: Ma, L]] |
| - | [[Category: | + | [[Category: Montelione, G T]] |
| - | [[Category: Xiao, R | + | [[Category: Structural genomic]] |
| - | + | [[Category: Xiao, R]] | |
[[Category: Acm]] | [[Category: Acm]] | ||
| + | [[Category: Acmd]] | ||
[[Category: Aminohydro_2]] | [[Category: Aminohydro_2]] | ||
[[Category: Lyase]] | [[Category: Lyase]] | ||
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[[Category: Nesg]] | [[Category: Nesg]] | ||
[[Category: Nitrobenzoic acid biodegradation]] | [[Category: Nitrobenzoic acid biodegradation]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Quin]] | [[Category: Quin]] | ||
[[Category: Quinolinic acid]] | [[Category: Quinolinic acid]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Tryptophan-nda metabolism]] | [[Category: Tryptophan-nda metabolism]] | ||
Current revision
Crystal Structure of Amidohydrorolase II; Northeast Structural Genomics Target LpR24
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Categories: Aminocarboxymuconate-semialdehyde decarboxylase | Lacpl | Large Structures | Acton, T | Arnold, E | Das, K | Ma, L | Montelione, G T | Structural genomic | Xiao, R | Acm | Acmd | Aminohydro 2 | Lyase | Metal dependent hydrolyse | Nesg | Nitrobenzoic acid biodegradation | PSI, Protein structure initiative | Quin | Quinolinic acid | Tryptophan-nda metabolism
