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2ehf
From Proteopedia
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==Solution structure of the third Sushi domain from human CUB and sushi domain-containing protein 1== | ==Solution structure of the third Sushi domain from human CUB and sushi domain-containing protein 1== | ||
| - | <StructureSection load='2ehf' size='340' side='right' caption='[[2ehf]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2ehf' size='340' side='right'caption='[[2ehf]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2ehf]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2ehf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EHF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EHF FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CSMD1, KIAA1890 ([ | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CSMD1, KIAA1890 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ehf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ehf OCA], [https://pdbe.org/2ehf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ehf RCSB], [https://www.ebi.ac.uk/pdbsum/2ehf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ehf ProSAT], [https://www.topsan.org/Proteins/RSGI/2ehf TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/CSMD1_HUMAN CSMD1_HUMAN]] Potential suppressor of squamous cell carcinomas. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eh/2ehf_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eh/2ehf_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ehf ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Human]] |
| - | [[Category: Hayashi, F | + | [[Category: Large Structures]] |
| - | [[Category: Inoue, K | + | [[Category: Hayashi, F]] |
| - | [[Category: Nagashima, T | + | [[Category: Inoue, K]] |
| - | [[Category: | + | [[Category: Nagashima, T]] |
| - | [[Category: Yokoyama, S | + | [[Category: Structural genomic]] |
| + | [[Category: Yokoyama, S]] | ||
[[Category: Csmd1]] | [[Category: Csmd1]] | ||
[[Category: Cub and sushi domain-containing protein 1 precursor]] | [[Category: Cub and sushi domain-containing protein 1 precursor]] | ||
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[[Category: National project on protein structural and functional analyse]] | [[Category: National project on protein structural and functional analyse]] | ||
[[Category: Nppsfa]] | [[Category: Nppsfa]] | ||
| - | [[Category: Riken structural genomics/proteomics initiative]] | ||
[[Category: Rsgi]] | [[Category: Rsgi]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Sushi domain]] | [[Category: Sushi domain]] | ||
Current revision
Solution structure of the third Sushi domain from human CUB and sushi domain-containing protein 1
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Categories: Human | Large Structures | Hayashi, F | Inoue, K | Nagashima, T | Structural genomic | Yokoyama, S | Csmd1 | Cub and sushi domain-containing protein 1 precursor | Cub and sushi multiple domains protein 1 | Immune system | National project on protein structural and functional analyse | Nppsfa | Rsgi | Sushi domain
