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2j85
From Proteopedia
(Difference between revisions)
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| - | ==B116 | + | |
| - | <StructureSection load='2j85' size='340' side='right' caption='[[2j85]], [[Resolution|resolution]] 2.39Å' scene=''> | + | ==B116 of Sulfolobus turreted icosahedral virus (STIV)== |
| + | <StructureSection load='2j85' size='340' side='right'caption='[[2j85]], [[Resolution|resolution]] 2.39Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2j85]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2j85]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfolobus_turreted_icosahedral_virus Sulfolobus turreted icosahedral virus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2blk 2blk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J85 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J85 FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j85 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j85 OCA], [https://pdbe.org/2j85 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j85 RCSB], [https://www.ebi.ac.uk/pdbsum/2j85 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j85 ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j8/2j85_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j8/2j85_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j85 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2j85" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Sulfolobus turreted icosahedral virus]] | [[Category: Sulfolobus turreted icosahedral virus]] | ||
| - | [[Category: Larson, E T | + | [[Category: Larson, E T]] |
| - | [[Category: Lawrence, C M | + | [[Category: Lawrence, C M]] |
| - | [[Category: Reiter, D | + | [[Category: Reiter, D]] |
| - | [[Category: Young, M J | + | [[Category: Young, M J]] |
[[Category: Archaea]] | [[Category: Archaea]] | ||
[[Category: Archaeal virus]] | [[Category: Archaeal virus]] | ||
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[[Category: Stiv]] | [[Category: Stiv]] | ||
[[Category: Sulfolobus]] | [[Category: Sulfolobus]] | ||
| - | [[Category: Sulfolobus turreted icosahedral virus]] | ||
[[Category: Viral protein]] | [[Category: Viral protein]] | ||
Current revision
B116 of Sulfolobus turreted icosahedral virus (STIV)
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