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2j3i
From Proteopedia
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| - | == | + | |
| - | <StructureSection load='2j3i' size='340' side='right' caption='[[2j3i]], [[Resolution|resolution]] 2.80Å' scene=''> | + | ==Crystal structure of Arabidopsis thaliana Double Bond Reductase (AT5G16970)-Binary Complex== |
| + | <StructureSection load='2j3i' size='340' side='right'caption='[[2j3i]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2j3i]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2j3i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J3I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J3I FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2j3h|2j3h]], [[2j3j|2j3j]], [[2j3k|2j3k]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2j3h|2j3h]], [[2j3j|2j3j]], [[2j3k|2j3k]]</div></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j3i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j3i OCA], [https://pdbe.org/2j3i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j3i RCSB], [https://www.ebi.ac.uk/pdbsum/2j3i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j3i ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/P1_ARATH P1_ARATH]] Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j3/2j3i_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j3/2j3i_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j3i ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2j3i" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Arath]] |
| - | [[Category: Bedgar, D L | + | [[Category: Large Structures]] |
| - | [[Category: Davin, L B | + | [[Category: Bedgar, D L]] |
| - | [[Category: Harper, A R | + | [[Category: Davin, L B]] |
| - | [[Category: Kang, C | + | [[Category: Harper, A R]] |
| - | [[Category: Kim, S J | + | [[Category: Kang, C]] |
| - | [[Category: Lee, C | + | [[Category: Kim, S J]] |
| - | [[Category: Lewis, N G | + | [[Category: Lee, C]] |
| - | [[Category: Moinuddin, S G | + | [[Category: Lewis, N G]] |
| - | [[Category: Youn, B | + | [[Category: Moinuddin, S G]] |
| + | [[Category: Youn, B]] | ||
[[Category: Apo form]] | [[Category: Apo form]] | ||
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
[[Category: Binary complex nadp]] | [[Category: Binary complex nadp]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
Current revision
Crystal structure of Arabidopsis thaliana Double Bond Reductase (AT5G16970)-Binary Complex
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Categories: Arath | Large Structures | Bedgar, D L | Davin, L B | Harper, A R | Kang, C | Kim, S J | Lee, C | Lewis, N G | Moinuddin, S G | Youn, B | Apo form | Arabidopsis thaliana | Binary complex nadp | Oxidoreductase
