2ia1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:02, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of protein BH3703 from Bacillus halodurans, Pfam DUF600==
==Crystal structure of protein BH3703 from Bacillus halodurans, Pfam DUF600==
-
<StructureSection load='2ia1' size='340' side='right' caption='[[2ia1]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
+
<StructureSection load='2ia1' size='340' side='right'caption='[[2ia1]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ia1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IA1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2IA1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ia1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans Alkalihalobacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IA1 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.59&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BH3703 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 Bacillus halodurans])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ia1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ia1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ia1 RCSB], [http://www.ebi.ac.uk/pdbsum/2ia1 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ia1 TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ia1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ia1 OCA], [https://pdbe.org/2ia1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ia1 RCSB], [https://www.ebi.ac.uk/pdbsum/2ia1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ia1 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ia1 TOPSAN]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9K6M5_HALH5 Q9K6M5_HALH5]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ia/2ia1_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ia/2ia1_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ia1 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus halodurans]]
+
[[Category: Alkalihalobacillus halodurans]]
-
[[Category: Almo, S C.]]
+
[[Category: Large Structures]]
-
[[Category: Burley, S K.]]
+
[[Category: Almo SC]]
-
[[Category: Freeman, J C.]]
+
[[Category: Burley SK]]
-
[[Category: Gheyi, T.]]
+
[[Category: Freeman JC]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Gheyi T]]
-
[[Category: Ramagopal, U A.]]
+
[[Category: Ramagopal UA]]
-
[[Category: Reyes, C.]]
+
[[Category: Reyes C]]
-
[[Category: Russell, M.]]
+
[[Category: Russell M]]
-
[[Category: Sauder, J M.]]
+
[[Category: Sauder JM]]
-
[[Category: Toro, R.]]
+
[[Category: Toro R]]
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of protein BH3703 from Bacillus halodurans, Pfam DUF600

PDB ID 2ia1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools