2gve

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==Time-of-Flight Neutron Diffraction Structure of D-Xylose Isomerase==
==Time-of-Flight Neutron Diffraction Structure of D-Xylose Isomerase==
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<StructureSection load='2gve' size='340' side='right' caption='[[2gve]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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<StructureSection load='2gve' size='340' side='right'caption='[[2gve]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2gve]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_rubiginosus Streptomyces rubiginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GVE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GVE FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2gve]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_rubiginosus Streptomyces rubiginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GVE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GVE FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene><br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Neutron Diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1xib|1xib]], [[2glk|2glk]], [[2gub|2gub]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene></td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Xylose_isomerase Xylose isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.5 5.3.1.5] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gve FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gve OCA], [https://pdbe.org/2gve PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gve RCSB], [https://www.ebi.ac.uk/pdbsum/2gve PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gve ProSAT]</span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gve FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gve OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2gve RCSB], [http://www.ebi.ac.uk/pdbsum/2gve PDBsum]</span></td></tr>
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</table>
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<table>
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== Function ==
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[https://www.uniprot.org/uniprot/XYLA_STRRU XYLA_STRRU] Involved in D-xylose catabolism.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gv/2gve_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gv/2gve_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gve ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 2gve" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
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*[[D-xylose isomerase|D-xylose isomerase]]
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*[[D-xylose isomerase 3D structures|D-xylose isomerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Large Structures]]
[[Category: Streptomyces rubiginosus]]
[[Category: Streptomyces rubiginosus]]
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[[Category: Xylose isomerase]]
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[[Category: Bunick GJ]]
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[[Category: Bunick, G J.]]
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[[Category: Carrell HL]]
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[[Category: Carrell, H L.]]
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[[Category: Coates L]]
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[[Category: Coates, L.]]
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[[Category: Glusker JP]]
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[[Category: Glusker, J P.]]
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[[Category: Hanson BL]]
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[[Category: Hanson, B L.]]
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[[Category: Katz AK]]
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[[Category: Katz, A K.]]
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[[Category: Langan P]]
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[[Category: Langan, P.]]
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[[Category: Li X]]
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[[Category: Li, X.]]
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[[Category: Schoenborn BP]]
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[[Category: Schoenborn, B P.]]
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[[Category: Isomerase]]
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[[Category: Protonation states of residue]]
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[[Category: Tim barrel-beta-alpha-barrel]]
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[[Category: Two metal binding site]]
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Current revision

Time-of-Flight Neutron Diffraction Structure of D-Xylose Isomerase

PDB ID 2gve

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