2iwa

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:12, 6 November 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Unbound glutaminyl cyclotransferase from Carica papaya.==
==Unbound glutaminyl cyclotransferase from Carica papaya.==
-
<StructureSection load='2iwa' size='340' side='right' caption='[[2iwa]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
<StructureSection load='2iwa' size='340' side='right'caption='[[2iwa]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2iwa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Carica_papaya Carica papaya]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IWA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2IWA FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2iwa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Carica_papaya Carica papaya]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IWA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IWA FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutaminyl-peptide_cyclotransferase Glutaminyl-peptide cyclotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.5 2.3.2.5] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2iwa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iwa OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2iwa RCSB], [http://www.ebi.ac.uk/pdbsum/2iwa PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iwa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iwa OCA], [https://pdbe.org/2iwa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iwa RCSB], [https://www.ebi.ac.uk/pdbsum/2iwa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iwa ProSAT]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O81226_CARPA O81226_CARPA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iw/2iwa_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iw/2iwa_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iwa ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 25: Line 28:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2iwa" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
Line 30: Line 34:
</StructureSection>
</StructureSection>
[[Category: Carica papaya]]
[[Category: Carica papaya]]
-
[[Category: Glutaminyl-peptide cyclotransferase]]
+
[[Category: Large Structures]]
-
[[Category: Arnau, J.]]
+
[[Category: Arnau J]]
-
[[Category: Garcia-Castellanos, R.]]
+
[[Category: Garcia-Castellanos R]]
-
[[Category: Gomis-Ruth, F X.]]
+
[[Category: Gomis-Ruth FX]]
-
[[Category: Guevara, T.]]
+
[[Category: Guevara T]]
-
[[Category: Lauritzen, C.]]
+
[[Category: Lauritzen C]]
-
[[Category: Mallorqui-Fernandez, N.]]
+
[[Category: Mallorqui-Fernandez N]]
-
[[Category: Pedersen, J.]]
+
[[Category: Pedersen J]]
-
[[Category: Petersen, G E.]]
+
[[Category: Petersen GE]]
-
[[Category: Sola, M.]]
+
[[Category: Sola M]]
-
[[Category: Acyltransferase]]
+
-
[[Category: Glutaminyl cyclase]]
+
-
[[Category: N-terminal cyclisation]]
+
-
[[Category: Pyroglutamate]]
+
-
[[Category: Transferase]]
+

Current revision

Unbound glutaminyl cyclotransferase from Carica papaya.

PDB ID 2iwa

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools