2k5d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:44, 9 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
 +
==SOLUTION NMR STRUCTURE OF SAG0934 from Streptococcus agalactiae. NORTHEAST STRUCTURAL GENOMICS TARGET SaR32[1-108].==
==SOLUTION NMR STRUCTURE OF SAG0934 from Streptococcus agalactiae. NORTHEAST STRUCTURAL GENOMICS TARGET SaR32[1-108].==
-
<StructureSection load='2k5d' size='340' side='right' caption='[[2k5d]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2k5d' size='340' side='right'caption='[[2k5d]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2k5d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_agalactiae_serogroup_v Streptococcus agalactiae serogroup v]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K5D FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2k5d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_agalactiae_serogroup_V Streptococcus agalactiae serogroup V]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K5D FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SAG0934 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=216466 Streptococcus agalactiae serogroup V])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2k5d RCSB], [http://www.ebi.ac.uk/pdbsum/2k5d PDBsum], [http://www.topsan.org/Proteins/NESGC/2k5d TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5d OCA], [https://pdbe.org/2k5d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k5d RCSB], [https://www.ebi.ac.uk/pdbsum/2k5d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k5d ProSAT], [https://www.topsan.org/Proteins/NESGC/2k5d TOPSAN]</span></td></tr>
-
<table>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8E006_STRA5 Q8E006_STRA5]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5d_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5d_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k5d ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Streptococcus agalactiae serogroup v]]
+
[[Category: Large Structures]]
-
[[Category: Acton, T B.]]
+
[[Category: Streptococcus agalactiae serogroup V]]
-
[[Category: Aramini, J M.]]
+
[[Category: Acton TB]]
-
[[Category: Everett, J K.]]
+
[[Category: Aramini JM]]
-
[[Category: Foote, E L.]]
+
[[Category: Everett JK]]
-
[[Category: Jiang, M.]]
+
[[Category: Foote EL]]
-
[[Category: Montelione, G T.]]
+
[[Category: Jiang M]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Montelione GT]]
-
[[Category: Nair, R.]]
+
[[Category: Nair R]]
-
[[Category: Rossi, P.]]
+
[[Category: Rossi P]]
-
[[Category: Rost, B.]]
+
[[Category: Rost B]]
-
[[Category: Sharma, S.]]
+
[[Category: Sharma S]]
-
[[Category: Swapna, G VT.]]
+
[[Category: Swapna GVT]]
-
[[Category: Xiao, R.]]
+
[[Category: Xiao R]]
-
[[Category: Zhao, L.]]
+
[[Category: Zhao L]]
-
[[Category: Construct optimized]]
+
-
[[Category: Duf961]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Primosomal protein]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Solution nmr structure]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

SOLUTION NMR STRUCTURE OF SAG0934 from Streptococcus agalactiae. NORTHEAST STRUCTURAL GENOMICS TARGET SaR32[1-108].

PDB ID 2k5d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2k5d"
Personal tools