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2rdx
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==Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM== | ==Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM== | ||
| - | <StructureSection load='2rdx' size='340' side='right' caption='[[2rdx]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='2rdx' size='340' side='right'caption='[[2rdx]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2rdx]] is a 8 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2rdx]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ISM Roseovarius nubinhibens ISM]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qye 2qye]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RDX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RDX FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rdx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rdx OCA], [https://pdbe.org/2rdx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rdx RCSB], [https://www.ebi.ac.uk/pdbsum/2rdx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rdx ProSAT]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A3SNF8_ROSNI A3SNF8_ROSNI] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rd/2rdx_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rd/2rdx_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rdx ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Mandelate racemase|Mandelate racemase]] | *[[Mandelate racemase|Mandelate racemase]] | ||
| + | *[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Roseovarius nubinhibens]] | + | [[Category: Large Structures]] |
| - | [[Category: Almo | + | [[Category: Roseovarius nubinhibens ISM]] |
| - | [[Category: Bonanno | + | [[Category: Almo SC]] |
| - | [[Category: Burley | + | [[Category: Bonanno J]] |
| - | [[Category: Gerlt | + | [[Category: Burley SK]] |
| - | [[Category: Gheyi | + | [[Category: Gerlt JA]] |
| - | [[Category: Gilmore | + | [[Category: Gheyi T]] |
| - | [[Category: Koss | + | [[Category: Gilmore M]] |
| - | [[Category: Lau | + | [[Category: Koss J]] |
| - | [[Category: Maletic | + | [[Category: Lau C]] |
| - | + | [[Category: Maletic M]] | |
| - | [[Category: Ozyurt | + | [[Category: Ozyurt S]] |
| - | [[Category: Patskovsky | + | [[Category: Patskovsky Y]] |
| - | [[Category: Sauder | + | [[Category: Sauder JM]] |
| - | [[Category: Wasserman | + | [[Category: Wasserman SR]] |
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Current revision
Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM
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Categories: Large Structures | Roseovarius nubinhibens ISM | Almo SC | Bonanno J | Burley SK | Gerlt JA | Gheyi T | Gilmore M | Koss J | Lau C | Maletic M | Ozyurt S | Patskovsky Y | Sauder JM | Wasserman SR
