1igp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:35, 7 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1igp.gif|left|200px]]
 
-
{{Structure
+
==X-RAY CRYSTALLOGRAPHIC STUDIES OF RECOMBINANT INORGANIC PYROPHOSPHATASE FROM ESCHERICHIA COLI==
-
|PDB= 1igp |SIZE=350|CAPTION= <scene name='initialview01'>1igp</scene>, resolution 2.2&Aring;
+
<StructureSection load='1igp' size='340' side='right'caption='[[1igp]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1igp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IGP FirstGlance]. <br>
-
|ACTIVITY= [http://en.wikipedia.org/wiki/Inorganic_diphosphatase Inorganic diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.1 3.6.1.1]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1igp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1igp OCA], [https://pdbe.org/1igp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1igp RCSB], [https://www.ebi.ac.uk/pdbsum/1igp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1igp ProSAT]</span></td></tr>
-
}}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/IPYR_ECOLI IPYR_ECOLI]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ig/1igp_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1igp ConSurf].
 +
<div style="clear:both"></div>
-
'''X-RAY CRYSTALLOGRAPHIC STUDIES OF RECOMBINANT INORGANIC PYROPHOSPHATASE FROM ESCHERICHIA COLI'''
+
==See Also==
-
 
+
*[[Inorganic pyrophosphatase 3D structures|Inorganic pyrophosphatase 3D structures]]
-
 
+
__TOC__
-
==Overview==
+
</StructureSection>
-
An E. coli inorganic pyrophosphatase overproducer and a method for a large-scale production of the homogeneous enzyme are described. The inorganic pyrophosphatase was crystallized in the form containing one subunit of a homohexameric molecule per asymmetric unit: space group R32, a = 110.4 A, c = 76.8 A. The electron density map to 2.5 A resolution phased with Eu- and Hg-derivatives (figure of merit, &lt;m&gt; = 0.51) was improved by the solvent flattening procedure (&lt;m&gt; = 0.77). The course of the polypeptide chain and the secondary structure elements, intersubunit contacts and positions of the active sites were characterized. Homology with S. cerevisiae inorganic pyrophosphatase structure was found.
+
-
 
+
-
==About this Structure==
+
-
1IGP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IGP OCA].
+
-
 
+
-
==Reference==
+
-
X-ray crystallographic studies of recombinant inorganic pyrophosphatase from Escherichia coli., Oganessyan VYu, Kurilova SA, Vorobyeva NN, Nazarova TI, Popov AN, Lebedev AA, Avaeva SM, Harutyunyan EH, FEBS Lett. 1994 Jul 18;348(3):301-4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8034059 8034059]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Inorganic diphosphatase]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Avaeva SM]]
-
[[Category: Avaeva, S M.]]
+
[[Category: Harutyunyan EH]]
-
[[Category: Harutyunyan, E H.]]
+
[[Category: Oganessyan VYu]]
-
[[Category: Oganessyan, V Yu.]]
+
-
[[Category: acid anhydride hydrolase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 11:50:06 2008''
+

Current revision

X-RAY CRYSTALLOGRAPHIC STUDIES OF RECOMBINANT INORGANIC PYROPHOSPHATASE FROM ESCHERICHIA COLI

PDB ID 1igp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools