2x39
From Proteopedia
(Difference between revisions)
(5 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | == | + | |
- | <StructureSection load='2x39' size='340' side='right' caption='[[2x39]], [[Resolution|resolution]] 1.93Å' scene=''> | + | ==Structure of 4-Amino-N-(4-chlorobenzyl)-1-(7H-pyrrolo(2,3-d)pyrimidin- 4-yl)piperidine-4-carboxamide bound to PKB== |
+ | <StructureSection load='2x39' size='340' side='right'caption='[[2x39]], [[Resolution|resolution]] 1.93Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2x39]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2x39]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X39 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X39 FirstGlance]. <br> |
- | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93Å</td></tr> |
- | <tr><td class="sblockLbl"><b>[[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene>, <scene name='pdbligand=X39:4-AMINO-N-(4-CHLOROBENZYL)-1-(7H-PYRROLO[2,3-D]PYRIMIDIN-4-YL)PIPERIDINE-4-CARBOXAMIDE'>X39</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x39 OCA], [https://pdbe.org/2x39 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x39 RCSB], [https://www.ebi.ac.uk/pdbsum/2x39 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x39 ProSAT]</span></td></tr> | |
- | + | </table> | |
- | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
- | <table> | + | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x3/2x39_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x3/2x39_consurf.spt"</scriptWhenChecked> |
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
- | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2x39 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
Line 27: | Line 26: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
+ | <div class="pdbe-citations 2x39" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
- | *[[Serine/threonine protein kinase|Serine/threonine protein kinase]] | + | *[[Serine/threonine protein kinase 3D structures|Serine/threonine protein kinase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
Line 35: | Line 35: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Aherne | + | [[Category: Aherne GW]] |
- | [[Category: Brandon | + | [[Category: Brandon AD]] |
- | [[Category: Caldwell | + | [[Category: Caldwell JJ]] |
- | [[Category: Cheung | + | [[Category: Cheung KM]] |
- | [[Category: Collins | + | [[Category: Collins I]] |
- | [[Category: Davies | + | [[Category: Davies TG]] |
- | [[Category: Eccles | + | [[Category: Eccles SA]] |
- | [[Category: Fazal | + | [[Category: Fazal L]] |
- | [[Category: Garrett | + | [[Category: Garrett MD]] |
- | [[Category: Henley | + | [[Category: Henley A]] |
- | [[Category: Hunter | + | [[Category: Hunter LJ]] |
- | [[Category: | + | [[Category: McHardy T]] |
- | [[Category: Raynaud | + | [[Category: Raynaud FI]] |
- | [[Category: Rowlands | + | [[Category: Rowlands M]] |
- | [[Category: Ruddle | + | [[Category: Ruddle R]] |
- | [[Category: Seavers | + | [[Category: Seavers L]] |
- | [[Category: Taylor | + | [[Category: Taylor K]] |
- | [[Category: Valenti | + | [[Category: Valenti M]] |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + |
Current revision
Structure of 4-Amino-N-(4-chlorobenzyl)-1-(7H-pyrrolo(2,3-d)pyrimidin- 4-yl)piperidine-4-carboxamide bound to PKB
|
Categories: Homo sapiens | Large Structures | Aherne GW | Brandon AD | Caldwell JJ | Cheung KM | Collins I | Davies TG | Eccles SA | Fazal L | Garrett MD | Henley A | Hunter LJ | McHardy T | Raynaud FI | Rowlands M | Ruddle R | Seavers L | Taylor K | Valenti M