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2rnl
From Proteopedia
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==Solution structure of the EGF-like domain from human Amphiregulin== | ==Solution structure of the EGF-like domain from human Amphiregulin== | ||
| - | <StructureSection load='2rnl' size='340' side='right' caption='[[2rnl]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2rnl' size='340' side='right'caption='[[2rnl]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2rnl]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2rnl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RNL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RNL FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AREG, SDGF ([ | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AREG, SDGF ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rnl OCA], [https://pdbe.org/2rnl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rnl RCSB], [https://www.ebi.ac.uk/pdbsum/2rnl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rnl ProSAT], [https://www.topsan.org/Proteins/RSGI/2rnl TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rn/2rnl_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rn/2rnl_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rnl ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Human]] |
| - | [[Category: Hayashi, F | + | [[Category: Large Structures]] |
| - | [[Category: Kigawa, T | + | [[Category: Hayashi, F]] |
| - | [[Category: Nojima, H | + | [[Category: Kigawa, T]] |
| - | [[Category: Qin, X | + | [[Category: Nojima, H]] |
| - | [[Category: | + | [[Category: Qin, X]] |
| - | [[Category: Shirouzu, M | + | [[Category: Structural genomic]] |
| - | [[Category: Terada, T | + | [[Category: Shirouzu, M]] |
| - | [[Category: Watanabe, S | + | [[Category: Terada, T]] |
| - | [[Category: Yabuta, N | + | [[Category: Watanabe, S]] |
| - | [[Category: Yokoyama, S | + | [[Category: Yabuta, N]] |
| + | [[Category: Yokoyama, S]] | ||
[[Category: Ar]] | [[Category: Ar]] | ||
[[Category: Colorectum cell-derived growth factor]] | [[Category: Colorectum cell-derived growth factor]] | ||
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[[Category: National project on protein structural and functional analyse]] | [[Category: National project on protein structural and functional analyse]] | ||
[[Category: Nppsfa]] | [[Category: Nppsfa]] | ||
| - | [[Category: | + | [[Category: Polymorphism]] |
[[Category: Rsgi]] | [[Category: Rsgi]] | ||
[[Category: Signaling protein]] | [[Category: Signaling protein]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Transmembrane]] | [[Category: Transmembrane]] | ||
Current revision
Solution structure of the EGF-like domain from human Amphiregulin
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Categories: Human | Large Structures | Hayashi, F | Kigawa, T | Nojima, H | Qin, X | Structural genomic | Shirouzu, M | Terada, T | Watanabe, S | Yabuta, N | Yokoyama, S | Ar | Colorectum cell-derived growth factor | Crdgf | Cytokine | Egf-like domain | Glycoprotein | Membrane | National project on protein structural and functional analyse | Nppsfa | Polymorphism | Rsgi | Signaling protein | Transmembrane
